Publication	Data		Fish	Anatomy
Sun et al., 2024	Figure 5		TU + MO4-ift88	whole organism curved, abnormal
Wang et al., 2022	Fig. 1.		ift88tz288/tz288	post-vent region curved ventral, abnormal whole organism dead, abnormal
	Fig. 4.		ift88tz288/tz288	retina has fewer parts of type retinal cone cell photoreceptor inner segment, abnormal retina lacks all parts of type retinal cone cell cone photoreceptor outer segment, abnormal retinal rod cell disorganized, abnormal
	Fig. 5.		ift88tz288/tz288	central canal has fewer parts of type ependymal cell motile cilium, abnormal pronephric duct anterior region lacks all parts of type multi-ciliated epithelial cell, abnormal pronephros cystic, abnormal
	Fig. S3		ift88tz288/tz288	whole organism ift88 expression absent, abnormal
Zhu et al., 2021	Fig. S4		ift88tz288/tz288	long double cone cell cell body decreased length, abnormal long double cone cell decreased amount, abnormal short double cone cell cell body decreased length, abnormal short double cone cell decreased amount, abnormal
	Figure 4		ift88tz288/tz288	eye photoreceptor cell photoreceptor connecting cilium Ab15-tuba labeling absent, abnormal eye photoreceptor cell photoreceptor connecting cilium absence of anatomical entity, abnormal
Li et al., 2020	Figure 4		WT + MO1-ift88	heart klf2a expression increased amount, abnormal heart cilium decreased amount, abnormal
Jin et al., 2019	Fig. 7		TU + MO1-ift88	pronephros cystic, abnormal
Liu et al., 2019	Fig. 2		hsc5Tg; pku6Tg + MO1-ift88	blood vessel cilium decreased amount, abnormal
	Fig. 3		ift88tz288/tz288 + MO1-ift88 ,   AB + MO1-ift88	hematopoietic progenitor cell differentiation decreased occurrence, abnormal ventral wall of dorsal aorta myb expression decreased amount, abnormal ventral wall of dorsal aorta myb expression decreased distribution, abnormal ventral wall of dorsal aorta runx1 expression decreased amount, abnormal ventral wall of dorsal aorta runx1 expression decreased distribution, abnormal
	Fig. 5		AB + MO1-ift88	hematopoietic progenitor cell differentiation decreased occurrence, abnormal ventral wall of dorsal aorta runx1 expression decreased amount, abnormal ventral wall of dorsal aorta runx1 expression decreased distribution, abnormal ventral wall of dorsal aorta hematopoietic multipotent progenitor cell decreased amount, abnormal
	Fig. 6		jh11Tg; y1Tg + MO1-ift88	ventral wall of dorsal aorta endothelial cell mCherry expression decreased amount, abnormal
Tsai et al., 2019	Fig. 5		AB/EKW + MO4-ift88	phototaxis decreased occurrence, abnormal retinal outer nuclear layer cytoplasm ab5-rho labeling mislocalised, abnormal
Cantaut-Belarif et al., 2018	Fig. 4		ift88tz288/tz288	Reissner's fiber Ab1-RF labeling spatial pattern, abnormal Reissner's fiber malformed, abnormal
Olstad et al., 2018	Fig. S6		ift88tz288/tz288	ventricular system cerebrospinal fluid circulation arrested, abnormal ventricular system cerebrospinal fluid circulation decreased process quality, abnormal ventricular system increased size, abnormal ventricular system motile cilium decreased amount, abnormal
Zhang et al., 2018	Fig. 1		ift88tz288/tz288	central canal cerebrospinal fluid circulation decreased occurrence, abnormal post-vent region curved ventral, abnormal trunk curved ventral, abnormal
Feng et al., 2017	Fig. 2		ift88tz288/tz288	retinal cone cell decreased amount, abnormal retinal cone cell degenerate, abnormal
Pooranachandran et al., 2016	Fig. 3		ift88tz288/tz288	photoreceptor cell ciliary basal body mislocalised, abnormal retinal cone cell absence due to degeneration, abnormal retinal cone cell decreased amount, abnormal retinal rod cell absence due to degeneration, abnormal retinal rod cell decreased amount, abnormal
Stawicki et al., 2016	Fig. 5		ift88tz288/tz288 (AB)	cilium assembly disrupted, abnormal neuromast hair cell kinocilium absent, abnormal
Bachmann-Gagescu et al., 2015	Fig. S3		ift88tz288/tz288	eye photoreceptor cell apoptotic, abnormal retinal photoreceptor layer apoptotic process increased occurrence, abnormal
Oltrabella et al., 2015	Fig. 5		AB + MO2-ift88	cilium assembly process quality, abnormal pericardium edematous, abnormal pronephros cystic, abnormal pronephros renal absorption decreased process quality, abnormal renal tubule dilated, abnormal whole organism anterior-posterior axis curved, abnormal
	Fig. 7		AB + MO2-ift88	pronephros renal absorption decreased process quality, abnormal
Samsa et al., 2015	Fig. 6		twu26Tg + MO1-ift88 + MO3-ift88 ,   s940Tg; vc6Tg + MO1-ift88 + MO3-ift88	atrioventricular canal endocardium Venus expression decreased amount, abnormal cardiac ventricle Venus expression decreased amount, abnormal heart notch1b expression decreased amount, abnormal heart nrg1 expression decreased amount, abnormal trabecular layer absent, abnormal
Blanco-Sánchez et al., 2014	Fig. 1		ift88tz288/tz288	anterior macula stereocilium bundle bent, abnormal anterior macula stereocilium bundle splayed, abnormal hair cell anterior macula apoptotic process increased occurrence, abnormal hair cell anterior macula stereocilium decreased amount, abnormal
Coxam et al., 2014	Fig. S8		ift88tz288/tz288	whole organism curved ventral, abnormal
Gerlach et al., 2014	Fig. 8		TU + MO2-ift88	pronephros epithelial cilium movement involved in extracellular fluid movement arrested, abnormal
Jin et al., 2014	Fig. 8		ift88tz288/tz288	cilium assembly decreased process quality, abnormal hair cell anterior macula cilium decreased length, abnormal
Pathak et al., 2014	Fig. 5		WT + MO1-ift88	pronephros multi-ciliated epithelial cell lacks parts or has fewer parts of type multi-ciliated epithelial cell cilium, abnormal
Borovina et al., 2013	Fig. 1		ift88tz288/tz288	brain hydrocephalic, abnormal mesoderm cilium aplastic, abnormal neural tube lacks all parts of type neural tube axoneme, abnormal pericardium edematous, abnormal pronephros cystic, abnormal whole organism curved, abnormal
	Fig. 3		ift88tz288/tz288	establishment of mitotic spindle orientation process quality, abnormal
	Fig. 4		ift88tz288/tz288	neural plate establishment of mitotic spindle orientation process quality, abnormal
Sittaramane et al., 2013	Fig. 7		ift88tz288/tz288	floor plate lacks all parts of type floor plate motile cilium, abnormal hindbrain has fewer parts of type branchiomotor neuron, abnormal rhombomere 4 branchiomotor neuron mislocalised, abnormal
McIntyre et al., 2012	Fig. 1		WT + MO4-ift88	gastrulation disrupted, abnormal notochord increased width, abnormal notochord kinked, abnormal somite increased width, abnormal whole organism anterior side disorganized, abnormal whole organism anterior-posterior axis shortened, abnormal
Nakao et al., 2012	Fig. 1		ift88tz288/tz288	retinal rod cell pigmented, abnormal
Delaval et al., 2011	Fig. 1		WT + MO1-ift88	establishment of mitotic spindle orientation disrupted, abnormal pronephric duct mitotic spindle direction, abnormal
	Fig. S2		WT + MO1-ift88	mitotic cell cycle process quality, abnormal
Evron et al., 2011	Fig. 5		WT + MO1-ift88	embryo development disrupted, abnormal somite disorganized, abnormal trunk curved, abnormal
	Fig. 6		WT + MO1-ift88	muscle pioneer decreased amount, abnormal slow muscle cell decreased amount, abnormal
	Fig. 8		WT + MO1-ift88	posterior neural tube cilium decreased amount, abnormal
Schneider et al., 2010	Fig. 4		WT + MO4-ift88	left/right pattern formation disrupted, abnormal
Lunt et al., 2009	Fig. 2		ift88tz288/tz288 ,   WT + MO3-ift88	cilium assembly disrupted, abnormal neural tube axoneme absent, abnormal otic vesicle cilium decreased amount, abnormal otic vesicle cilium decreased length, abnormal otic vesicle decreased size, abnormal
Sukumaran et al., 2009	Fig. 1		ift88tz288/tz288	eye photoreceptor cell photoreceptor inner segment membrane disorganized, abnormal eye photoreceptor cell photoreceptor outer segment absent, abnormal
	Fig. 2		ift88tz288/tz288	eye photoreceptor cell photoreceptor connecting cilium absent, abnormal eye photoreceptor cell photoreceptor inner segment membrane disorganized, abnormal eye photoreceptor cell photoreceptor inner segment membrane displaced, abnormal eye photoreceptor cell photoreceptor outer segment absent, abnormal
	Fig. 3		ift88tz288/tz288	eye photoreceptor cell nucleus decreased length, abnormal eye photoreceptor cell photoreceptor outer segment absent, abnormal
	Fig. 5		ift88tz288/tz288	retinal cone cell morphology, abnormal
	Fig. 7		ift88tz288/tz288	retinal cone cell morphology, abnormal
	Fig. 9		ift88tz288/tz288	retinal cone cell morphology, abnormal
Vasilyev et al., 2009	Fig. 7		sqet33D10Et + MO2-ift88 (AB)	cell migration arrested, abnormal proximal convoluted tubule development arrested, abnormal
Krock et al., 2008	Fig. 1		ift88tz288/tz288 ,   WT + MO3-ift88	retina photoreceptor outer segment absent, abnormal retinal outer nuclear layer eye photoreceptor cell apoptotic, abnormal retinal outer nuclear layer perforate, abnormal
	Fig. 2		ift88tz288/tz288	blue sensitive photoreceptor cell morphology, abnormal eye photoreceptor cell cilium absent, abnormal retinal cone cell decreased length, abnormal retinal photoreceptor layer eye photoreceptor cell apoptotic, abnormal retinal rod cell morphology, abnormal
	Fig. 3		ift88tz288/tz288	intraciliary transport disrupted, abnormal retina photoreceptor outer segment absent, abnormal
	Fig. 4		ift88tz288/tz288	retina photoreceptor outer segment absent, abnormal
	Fig. S1		ift88tz288/tz288 ,   WT + MO3-ift88	eye decreased size, abnormal post-vent region curved ventral, abnormal pronephros cystic, abnormal
Omori et al., 2008	Fig. 1		ift88tz288/tz288	cilium assembly disrupted, abnormal
Pathak et al., 2007	Fig. 8		ift88unspecified/unspecified	cilium assembly disrupted, abnormal pronephros cilium decreased length, abnormal
Phenotype Annotation (1994-2006)	Fig. for (tz288)		ift88tz288/tz288	eye quality, abnormal nervous system quality, abnormal post-vent region curved, abnormal pronephros quality, abnormal sensory system quality, abnormal whole organism shape, abnormal