ZFIN ID: ZDB-GENE-980526-436

Mapping Details

Gene Name:	retinoid x receptor, beta a
Symbol:	rxrba

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	19	8,299,972 - 8,328,155	GRCz12tu
NCBI Map Viewer	19	8,299,972 - 8,328,155	GRCz12tu
Ensembl	19	7,249,041 - 7,274,844	GRCz11
NCBI Map Viewer	19	7,244,838 - 7,273,020	GRCz11
UCSC	19	-	GRCz11
UCSC	19	-	GRCz11
Vega	19	7,330,116 - 7,355,919	GRCv10

Mapped Clones containing rxrba
BUSM1-12F11	Chr: 19 Details
DKEYP-84F11	Chr: 19 Details
CH73-216M24	Chr: 19 Details
CH1073-247J7	Chr: 19 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa43215	19	8,305,473	GRCz12tu	DIRECT		Sealy et al., 2025
	19	7,250,339	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	7,331,414	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	7,872,875	Zv9	DIRECT		Busch-Nentwich et al., 2013
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	50.7 cM	rxre	Mother of Pearl (MOP)	Postlethwait, John H.	Data
19	132.13 cR	rxre	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
19	919.0 cR	rxre	Goodfellow T51 (T51)	Geisler, Robert	Data
19	37.6 cM	rxre	Heat Shock (HS)	Woods, Ian G.	Data
19	12.72 cM	rxre	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by rxrba
fb93c09 Ambiguous Details

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	722	DpnII	36.0
Forward Primer	GACACCCCAATCGACACCTT
Reverse Primer	AGATGCAGCAGGCCAAGAAT