Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
6	51.3 cM	z10183	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
6	399.15 cR	Z10183	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
6	5206.0 cR	z10183	Goodfellow T51 (T51)	Geisler, Robert	Data
6	92.7 cM	z10183	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
foxd3	GENE	6		Montero-Balaguer et al., 2006	Montero-Balaguer, et al. (2006. Dev. Dyn. 235:3199-3212) reports mapping m188 to the foxd3 gene, between SSLPs Z15259 and Z10183, and near STS BO3194R/F.
z15259	SSLP	6		Montero-Balaguer et al., 2006	Montero-Balaguer, et al. (2006. Dev. Dyn. 235:3199-3212) reports mapping m188 to the foxd3 gene, between SSLPs Z15259 and Z10183, and near STS BO3194R/F.
m188	Feature	6		Montero-Balaguer et al., 2006	Montero-Balaguer, et al. (2006. Dev. Dyn. 235:3199-3212) reports mapping m188 to the foxd3 gene, between SSLPs Z15259 and Z10183, and near STS BO3194R/F.
z13538	SSLP	6		Pham et al., 2001	Pham, et al. (2001. Dev Dyn 221:470-474.) report mapping angptl3 to LG06  ... Pham, et al. (2001. Dev Dyn 221:470-474.) report mapping angptl3 to LG06 between z13538 and z10183 on the LN54 panel.
angptl3	GENE	6		Pham et al., 2001	Pham, et al. (2001. Dev Dyn 221:470-474.) report mapping angptl3 to LG06  ... Pham, et al. (2001. Dev Dyn 221:470-474.) report mapping angptl3 to LG06 between z13538 and z10183 on the LN54 panel.
zdf10	Feature	6		Stewart et al., 2006	Genetic linkage analysis of the zdf10 phenotype to 239 microsatellite markers  ... Genetic linkage analysis of the zdf10 phenotype to 239 microsatellite markers revealed that markers z5294 and z10183 were within 1-2 cM from the zdf10 mutation on chromosome 6.

OTHER MAPPING INFORMATION

Chr 6 Pham et al., 2001 Pham, et al. (2001. Dev Dyn 221:470-474.) report mapping angptl3 to LG06 between z13538 and z10183  ... Pham, et al. (2001. Dev Dyn 221:470-474.) report mapping angptl3 to LG06 between z13538 and z10183 on the LN54 panel.   Chr 6 Stewart et al., 2006 Genetic linkage analysis of the zdf10 phenotype to 239 microsatellite markers revealed that markers  ... Genetic linkage analysis of the zdf10 phenotype to 239 microsatellite markers revealed that markers z5294 and z10183 were within 1-2 cM from the zdf10 mutation on chromosome 6.   Chr 6 Montero-Balaguer et al., 2006 Montero-Balaguer, et al. (2006. Dev. Dyn. 235:3199-3212) reports mapping m188 to the foxd3  ... Montero-Balaguer, et al. (2006. Dev. Dyn. 235:3199-3212) reports mapping m188 to the foxd3 gene, between SSLPs Z15259 and Z10183, and near STS BO3194R/F.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,245		60.0
Forward Primer	CCGACATGGACAGACAATTG
Reverse Primer	TGTGTCCTGTTGGGGATACA
IND	0,231,213		60.0
Forward Primer	CCGACATGGACAGACAATTG
Reverse Primer	TGTGTCCTGTTGGGGATACA
EKW	219,0,221		60.0
Forward Primer	CCGACATGGACAGACAATTG
Reverse Primer	TGTGTCCTGTTGGGGATACA
TU	223,0,245		60.0
Forward Primer	CCGACATGGACAGACAATTG
Reverse Primer	TGTGTCCTGTTGGGGATACA