ZFIN ID: ZDB-GENE-980528-2059

Mapping Details

Gene Name: bone morphogenetic protein 4
Symbol: bmp4
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 17 50,564,070 - 50,586,135 GRCz11
Ensembl 17 50,564,070 - 50,586,135 GRCz11
Vega 17 50,485,001 - 50,507,066 GRCv10
NCBI Map Viewer 17 50,564,103 - 50,586,135 GRCz11
UCSC 17 - GRCv10
Mapped Clones containing bmp4
CH211-287A24 Chr: 17 Details
CH73-374D11 Chr: 17 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
b1150 17 50,584,570 GRCz11 Lenhart et al., 2011
sa36537 17 50,584,570 GRCz11 Busch-Nentwich et al., 2013
17 50,505,501 GRCz10 Busch-Nentwich et al., 2013
17 51,114,684 Zv9 Busch-Nentwich et al., 2013
st72 17 50,584,131 GRCz11 ZFIN Curated Data
umo32 17 50,574,163 - 50,574,167 GRCz11 Zebrafish Nomenclature Committee
la010179Tg 17 51,095,488 - 51,095,498 Zv9
la013167Tg 17 51,094,290 - 51,094,300 Zv9

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
17 67.7 cM bmp4 Boston MGH Cross (MGH) Fishman, Mark C. Data
17 197.2 cM bmp4 Mother of Pearl (MOP) Postlethwait, John H. Data
17 413.93 cR bmp4 Loeb/NIH/5000/4000 (LN54) Johnson, Stephen L. Data
17 4952.0 cR bmp4 Goodfellow T51 (T51) Geisler, Robert Data
17 113.5 cM bmp4 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z9692 SSLP 17 Stickney et al., 2007 mutation mapped by Stickney et al. (2007)
z11340 SSLP 17 Stickney et al., 2007 mutation mapped by Stickney et al. (2007)
st37 Feature 17 0.0 cM Stickney et al., 2007 mutation mapped by Stickney et al. (2007)

OTHER MAPPING INFORMATION
Genomic Feature st37 is an allele of bmp4
Marker Type Chr Distance Publication / Person Comments
bmp4 GENE 17 0.0 cM Stickney et al., 2007 mutation mapped by Stickney et al. (2007)
z9692 SSLP 17 Stickney et al., 2007 mutation mapped by Stickney et al. (2007)
z11340 SSLP 17 Stickney et al., 2007 mutation mapped by Stickney et al. (2007)
Primer Sets:
Strain Bandsize Restriction Enzyme Annealing Temperature [C]
AB NA
Forward Primer CTGTGAGGAGCTTCCATCACGAA
Reverse Primer GGAATCGGCAGAGGCTGTCTCC
IND NA
Forward Primer CTGTGAGGAGCTTCCATCACGAA
Reverse Primer GGAATCGGCAGAGGCTGTCTCC
SJD 307 36.0
Forward Primer TAGGCTGGAACGACTGGATT
Reverse Primer TGTCCACGTGTGGATGTTTT