Genomic Feature

cu201

ID
ZDB-ALT-210201-1
Name
cu201
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
CRISPR 
Lab of Origin
Horvath Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 10: 35002959 - 35002960 (GRCz11) (1) Details
Nucleotide change
AG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted from position 26 to 27 in RefSeq:NM_001002865 in Exon 2 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
TATTGCTCTGCAGAGACGCTGACAGCAGTTTACCGCTCAGTTAAAGCACGCGGAGCGTTAAAAACAGCCTCTCTGTGACTTCTCGAGGCGGGACATATATGAATGGATGTCGTACTAAATTACGGAATAAATACTTAAATCTCCATTGTTGAACTTTACTTCCAGTCACAGAGAAACACCTACGCGGAAGTCGCCTTGACAAACCACATCATCACAGCCATGATCACAGCGGGCGAAGAAAGCGCAGATTCCGCCGTGACCAACTGAAATAGCGCCACACACCAGAGCGGAGGACGCGAAGTTCTCCGCTTTTACGTCACTGCAGTTATTCACGTGGTGCTTCCAAACATCATGGCGGCTGGTTTTAAGTGAGCTACATGTGCAAATTGTTTTTATAATACTATTAATGATTTATATAGGTGTCTAAATAGTGAGGTGATGATTTCGCTATTTTATTTCAGCTGAATCATGTTGTGTTATTGTTTATTTCAGAACCGCAG
AG/- CCTCTTGAATATCACCGGAGCTTTCTGGTGAGAGTTAATCTTTATTCATATTTAGATTGTGGTAGTTATAAAGTTCTTTTTGTTATAAATTGTTAATGTTCAGTGATTTTTTAAACCCTAATATTCAATAGAAAGAAAACTGTCGTCCAGATGGAAGGGAGTTGGGAGAGTTTAGACCCACGACGTTAAATATTAGTAAGTCTGGGTTGTTTTTATGGAGTACCTCTACCAAATACTTGACCATATTTTGACTGTATTAAATAATGACTTTTTTATTTAATGGTTTACACACACACACACACACACACACACACACACACACACACACACACACAGCATTCTGTTGCACTACTACGTTTGATTTTGGTTTTATTTAAAAAAAACAACAACAAAACATGTTAAATGAGAGAATCTGAAGTATTTATGCCATACTTAAAAAAATTAAGATAATTTAATATTCAAAAATGTTTTATTTTAAATATAAAAAAAATCTATTTGTC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations