Genomic Feature

xu086

ID
ZDB-ALT-200831-3
Name
xu086
Synonyms
  • e2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Xu Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 17817670 - 17817677 (GRCz11) (1) Details
Nucleotide change
TGTACGTG/-
Variant Notes
A27fs109aa*
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AAAATGTTACCAACTTAATTCCACTTAAGGGCACTTGACATGGAGTGCAAACCAGAGTTGTGCAGATGCAAAACAGTATATAGTTTCAAAAAGTTTAGTATAATGCAAAACAGTATAAAGCTTGTAAATATGATAAAGTGGCAGTGTCTTAATATGCAGTTAGTAAGATCTAAGTAAAGTATTGAGCATTTATGTATGTATAATGAACAAAATTTACAACTACAGACTAGCAAGTAGCTTCAAGTTCAATTTTGCTTAACAAAATTTTCTACATACATAAAATGCATTGTCTTATTACCGAAATGTGAAATTACTTTTACAGTGTTTGAATATTTTTCAATATTTACTTCACCTCAGTTATGTTTACTTGAATTATGTGTATTTGTTTTTTCATTATGTAATCTAAATATAGTAACGTTCATTCTTGTGTGTTTTCCATAGGGTTCCTGAAGCCCCAGTGCTCACTACCGCCGCCACCTCAGAGAGGACGAGCAGAAGCA
TGTACGTG/- TTTCAGCGGAATGTGTGCTCTTCATCAACGCAGGCTTTCTACAGGTAACGTGCATATTCAGAAATTTTCTTCATAGTGCCTAAACTCCAAACAGTAACTTCACTTTTGGCAGCTTTGCAGCTCCACCACAAAATAATTCTGCCTTTTTTGTGTGCCTCAACTGTTCCCATGAAACCCCATGGTTCTTACTTTGAAGAACATTCAAAATACTTGCATAAATCAATGCACTGAAGTCATATTTAGAGCCTTAAACTGCTTTCCACTGTGCTTGGCTATAACTCATGACAAATATGTCTGGTCTTGTAATATGTCTGCGTCTGCAAGAAACAAGACACATCATGCACCACATATGTACACATACAAATACAGTTTCAACTGTGAAAGAGTGTCTGGCACCCTGCAGATGTTTCTGCAGTGCTACAGTGTGTGATTTACTGTTTGTTATGCTGGTTTAAACGGCTGATGGACATGTTAGCAATCGCTCTTCTCTAAGTGATCTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations