Genomic Feature
hg92
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 7: 71328344 - 71328347 (GRCz11) (1) Details
- Nucleotide change
- CAGA/-
- Variant Notes
-
Deletion 4 bp in exon 2, cDNA: 338_341delTCTG,
p. Val113GlyfsX11
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp deleted in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CGTGTATATGAGAGGGAGAGACCTTTGCGCACTTACTGTAATATGTCTGAGAAAATCTAAATAATCAGCTCAGCTCTCAGAACATAGTAACCATAGTAACCTAGTAAGTCTATTCATGGACACACACACACACACACACACACACACACTATAATCAGCCGTTTTACTCCATAAAATGCTATAAAAAAAGCCCAAAACTAGTTTGCACAGGCCTATCTAAAGTGTTAATGCTGTCAACTGATGACCAACAGTAAAAATTACAAATTTTATCTCATGATTGTGGAACTAAACAAATAAAAAGCATAAATAAATGCAATAAAGCAAAGATAAAAGTGAAATAAACAGCGTTTATGGTTATGTAAATGTAAAAATGACACTGCAAAGGTATATGGAAAATTCTATGCAGTCTAACCTGTGTGGTCTTTCCAGAGCCGGTCTCTCCTACGAGCACAAAGCTCTGATGGCGGTTCAGGATGTCATTAAAGCGCTCTTTATACTCC
CAGA/- CGGGCAACTGCAGCCTCTTCTTGAGGATCTCGTAGTAGCGTGGCGTGTGAGGCAGGTTGGTGAAGGGGTTGATCTGCTGATGCATGCTGGCCTGCTTCAGAGGAAGGATTCCGCTTCCAGACACGCTGGAGCTGAGCGCCGCACTCGACGACTTGCTGTCTCTCTCTCGGTCGCGATCGCGGTCTCGGTCTCTGTCACGATCGCGCTCACGGTCCCGGTCACGATCTCGATCCTTTGATCGCTCATCCCGATCTCTGTCACGGTCCTTCCTGATGGGGAAAAAATAATGCATCCCTTAAGCTTAATCATCAAATGCATTTGGTTTGATAATTTAAGTTTCCTCATGAGCACACAAAATCTGAGCTCACAGAAATCTGCTGCTTTTTTTTAGCCAATCATTGAGTCTATTTATTTACTTAATTAAATGTGTAAATATCTCTTTATCACGTTTTTATATTAAATTCAGCAATATTTATTAACTAATATGCAAATGTCTGTAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None