Genomic Feature

uq21ks

ID
ZDB-ALT-190103-3
Name
uq21ks
Synonyms
  • uqks21 (1)
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Kelly Smith Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Insertion
Variant Location
Chr 8: 48609912 - 48609913 (GRCz11) (1) Details
Nucleotide change
-/TACTTATCTG
Variant Notes
Functional null - predicted mutant protein lacks the C-terminal region, which  ...
Exon 2 of nppb was targeted by CRISPR1-nppb, resulting in a 10 bp  ...
mutation sequence details
nppb, Chr  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp inserted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCGACAGCAGCCTTTATCAGGGGCTGAGGTGTCGGAATGCAGCGGTCATTCCTCACATTACTGGCGTGTCAAACTTTTAGGTATAAAAGACCTCGAAGTTCTTCTGAGGGGAATACAGACGACTACACAGAGAGCACAGAAGAACTGCGAAGAAGATTTAAAAAAAAAAAAGTATATCAGGAGACATGAAATCGCTTCACATTCCCGTAGTCGGCCTTCTCTTTCTCCTCAGCGTTCAACACATGAGGACATTCCCGCTTCAAAGCACAGCCTTAACAAACGACGACATGGGTGTTTTAAAGGTAAGACTTAAAAATCTTAATATTCATCAAAAAGCGAAGTGAATGATTACTAATAAATCACATGCGACCTCTTTCAGTTTCTCCTTCAACGACTTGAAGAGTCCATTCCAGCTCAAGACCAAACACCGGCGGAAAGAGAAGTAAAGGCGGCAAATATTGAAGAAACCCGAGCTGAAGAGCAGCCCGATACTTACCTGAG
-/TACTTATCTG AGAGTATCTTTCTGCTCGGGACTTAAAGACTGTGCGTAAAGACTCAAAGAAGAAAAACTCGGGGTGTTTCGGGAGCAAACTGGACAGAATCGGTTCAATGTCGTCTTTGGGATGTAACACAGTCGGGCGCTCAGGTAGCCTACATTATAAATACTTCAACATAAATAGCGTATTTTAAATAAATATGCTTTTTATTTGTTTGTTTGTTTGTCTATTCAATATGTTAAAAAACTTAAACATTTCTCTTCTTTTTCAGGTCCCAAGAAGAACTGAAGTCTTAATGATTAGAAATTCTACACTGTAAACAATGAACATGCGTTGTTTCTACTTGATTTAACCTCACAATGACCTCTTTTGGTAACCTAATGTATTCAGGTTAATACGAAATATATGTATTTTTTTACTTAAAAGAGTAAATTTGTTACCATTTGAAGCGCATTTTAAGGTTATCCGACCCAATATTTTTTTACAGTGTCATTTTCTCCGATTTAAAGTGTTCTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations