Genomic Feature

cl600

ID
ZDB-ALT-180410-2
Name
cl600
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Hildebrandt Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 4: 5332243 - 5332252 (GRCz11) (1) Details
Nucleotide change
CCTCCTGGAG/-
Variant Notes
Guide RNA 3 against osgep (NM_001017751.2) induced a deletion of 10 bp in Exon  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGCCCCACAGTTGGGCGACTGTCCTGGCCACAATGGCTACTGTCACCAGCGGAGCCCCCATTCCAGGCCCTGTACAACAGGAGACATTTGAGAAGTGGAGCTAGACGGATGCACATATTCAATAAATTGTAATAACGAACATGCATGATACTGATATTGTACTGTGGCCACTTTAATCTTAATAGTTGTCAATAGTTATATATAAATAAAATTGAAATGCATTGAGATGGATTGTTGGTGATTGTATGGATGTTGGCCTGATTGGGTAACTTTATATGTGCATTGGAAAATTAAGACCCGTTTAAAATGATTTAAGACCTACAGTACAATTTATATTCTGTTCATTTAAGACTTTTTAAGGCCTCAAATTTAGTTTTTGAAATTTAAGACCCCGCGGACACCATGAGTTGTGGAAAAACACTTGCAAGTAAATCATAATTCACCTTTTGTGTACGCGACACAATCAATATCTGCAGCTTTCAGGCCTGCTTCATCGAGAG
CCTCCTGGAG/- GACCGTGAGGATCACACTGCGATGGTGTTTGGCAGTTTCGCCCGGTAGGAACCCTGAGGAGGTATAATGAGTTATGGTATCATGATGGTACTTGTATGTGAATATGCCACTGTTTATGATTTTACAGGTGTGGTCTGATGCTCTCACCTTGTCCAGGTGGGGTGATGTAAGTTCGTCTTGGGTTTGACAGCACTTCTCCATCTTTAATAATACCAATGCCGATCTTATTAGCACTGCCTTCAAAACCAATCACTATCGTCATTGTGTCTGCAGAGAGAGAGAAACGGGAATCATCTGATGAAAGTCATCTTTAGGCTTTTGATAACTCTTAACATCAGTATGAAAAAGTATTTCTTCATATATATATACATACACACAATTCGGGTAACACTTTACAATAAGTTTGTATAAGTTAATGCAATTACAACACATTTATTACAGTACTTGTTCATGTTAACCTTAATTAAATAGTTGTTCATTGTTAGTTCATGTTAACTCAG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations