Genomic Feature

el540

ID
ZDB-ALT-160325-2
Name
el540
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Crump Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 37815730 - 37815746 (GRCz11) (1) Details
Nucleotide change
GCCTGCTGGATATCAAT/-
Variant Notes
WT irx7 .....TGCCTGCTGGATATCAATT

el540 irx7 . T - - - - - - - - -  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
17 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGCAAATCCAAAATAAGAAACATATTTTAACCAGATAATATAGCAACAAAATATTGTTTGCTTACGTTTTGGACTTATAATAATTATCTAGTTTTAAACAGACGAATTGTATACATGTATCCACTATGTAATGGATTTAAAAGTTAATGAAGTCCAATCAAACGCTGAATCCATCATCTCTAGAAAATGAGAATTTCAAACGATGCCCTACTTTGTTCACTCCTCAGTACGGATAAGCATGAGATAATCATCGTGAGTTTAAAGACTTTTAGATGCCGTTAAAAGGAACAACCGAAGTTCTTTGAAGGGATTTAGTCCCAGTGAAAGCCTTTGGACCGCAGCTGTCAATCAACCGCCCTGGCTCCGCCTACATTCGCTGCTCCTCCTATAAAGTGCGCCCGTGAACTCGAGTGTCATTTAAACACCAGAGCTCAGGGAGTAAGGATGCCTGCTTCATCAACGGGGTTTGCAAACTTCTTCATGGACAGAAACATCAACAT
GCCTGCTGGATATCAAT/- TATTAGGCTGCCCACCTGGAATGCAACAGCCACCGCCACATCTTGTGGGAATGGCCGGGATGCCCTTACCTTTCTCAGGAATACCGGGCTACAGTTTCATCCCTTATCCTCATCCGGGACACATGGCACACATTGTAAGTAGTATTTTGACTGATTTCTAATATATGTGCATTAAAAAATAAATGTTTATTAATTTTAATTAGGATTAATGCAGGATGAAACACTTTTCGCAATGATATTTATATTCTAAAATACTTCATGCTTACTTTCAGAGCAATTCCTATGACCTCAAGGCTGCATCGCCGTATCACCAAGCTCTCCTCGGACGGGGAGGACCATACTACACCCCGTATCGTCCCATCCCAGCTGACGACCCCAGTCGGGTCACTAAAGTTGCCACCCGGGAAAGCACCAGCGCTTTGAAGGCCTGGCTCAGCGAGCACCTGAAAAACCCATATCCCACCAAAGGCGAGAAGATCATGCTTGCCATCGTCACCAAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.