PUBLICATION

Comprehensive series of Irx cluster mutants reveals diverse roles in facial cartilage development

Authors
Farmer, D.T., Patel, P., Choi, R., Liu, C.Y., Crump, J.G.
ID
ZDB-PUB-210803-8
Date
2021
Source
Development (Cambridge, England)   148(16): (Journal)
Registered Authors
Keywords
Cartilage, Craniofacial skeleton, Fin, Irx, Zebrafish
MeSH Terms
  • Chondrogenesis/genetics*
  • Transcription Factors/genetics
  • Transcription Factors/metabolism*
  • Skull/embryology*
  • Gene Expression
  • Gene Expression Regulation, Developmental
  • Mutant Proteins/metabolism*
  • Mutation
  • Zebrafish Proteins/genetics
  • Zebrafish Proteins/metabolism*
  • Alleles
  • Multigene Family*
  • Zebrafish/embryology*
  • Zebrafish/genetics*
  • Body Patterning/genetics
  • Neural Crest/metabolism
  • Animals
  • Homeodomain Proteins/genetics
  • Homeodomain Proteins/metabolism*
  • Animals, Genetically Modified
  • Cartilage/embryology*
(all 21)
PubMed
34338288 Full text @ Development
Abstract
Proper function of the vertebrate skeleton requires the development of distinct articulating embryonic cartilages. Irx transcription factors are arranged in co-regulated clusters that are expressed in the developing skeletons of the face and appendages. IrxB cluster genes are required for the separation of toes in mice and formation of the hyoid joint in zebrafish, yet whether Irx genes had broader roles in skeletal development remained unclear. Here we perform a comprehensive loss-of-function analysis of all 11 Irx genes in zebrafish. We uncover conserved requirements for IrxB genes in formation of the fish and mouse scapula. In the face, we find a requirement for IrxAb genes and irx7 in formation of anterior neural crest precursors of the jaw, and for IrxBa genes in formation of endodermal pouches and gill cartilages. We also observe extensive joint loss and cartilage fusions in animals with combinatorial losses of Irx clusters, with in vivo imaging revealing that at least some of these fusions arise through inappropriate chondrogenesis. Our analysis reveals diverse roles for Irx genes in the formation and later segmentation of the facial skeleton.
Genes / Markers
Figures
Figure Gallery (7 images)
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Expression
Phenotype
Fish Conditions Stage Phenotype Figure
irx1ael830/el830; irx2ael831/el831; irx4ael832/el832standard conditionsDay 4
irx1ael830/el830; irx2ael831/el831; irx4ael832/el832standard conditionsDay 4
irx1bel833/el833; irx1ael830/el830; irx2ael831/el831; irx4ael832/el832; irx4bel834/el834standard conditionsDay 5
irx1bel833/el833; irx3ael835/el835; irx3bel837/el837; irx5ael576/el576; irx5bel722/el722; irx6ael836/el836; irx1ael830/+; irx2ael831/+; irx4ael832/+; irx4bel834/el834standard conditionsDay 4
irx1bel833/el833; irx3ael835/el835; irx3bel837/el837; irx5ael576/el576; irx5bel722/el722; irx6ael836/el836; irx7el540/el540; irx1ael830/+; irx2ael831/+; irx4ael832/+; irx4bel834/el834standard conditionsDay 4
irx1bel833/el833; irx3ael835/el835; irx3bel837/el837; irx5ael576/el576; irx5bel722/el722; irx6ael836/el836; irx7el540/el540; irx1ael830/+; irx2ael831/+; irx4ael832/+; irx4bel834/el834standard conditionsDay 4
irx1bel833/el833; irx3ael835/el835; irx3bel837/el837; irx5ael576/el576; irx5bel722/el722; irx6ael836/el836; irx7el540/el540; irx1ael830/+; irx2ael831/+; irx4ael832/+; irx4bel834/el834standard conditionsDay 4
irx1bel833/el833; irx3ael835/el835; irx3bel837/el837; irx5ael576/el576; irx5bel722/el722; irx6ael836/el836; irx7el540/el540; irx1ael830/+; irx2ael831/+; irx4ael832/+; irx4bel834/el834standard conditionsDay 4
irx1bel833/el833; irx3ael835/el835; irx3bel837/el837; irx5ael576/el576; irx5bel722/el722; irx6ael836/el836; irx7el540/el540; irx1ael830/+; irx2ael831/+; irx4ael832/+; irx4bel834/el834standard conditionsDay 4
irx1bel833/el833; irx4bel834/el834standard conditionsDay 4
1 - 10 of 50
Show
Mutations / Transgenics
Allele Construct Type Affected Genomic Region
el10TgTransgenic Insertion
    el540
      Small Deletion
      el576
        Small Deletion
        el722
          Small Deletion
          el830
            Indel
            el831
              Indel
              el832
                Indel
                el833
                  Small Deletion
                  el834
                    Indel
                    el835
                      Small Deletion
                      1 - 10 of 15
                      Show
                      Human Disease / Model
                      No data available
                      Sequence Targeting Reagents
                      Fish
                      Antibodies
                      No data available
                      Orthology
                      No data available
                      Engineered Foreign Genes
                      Marker Marker Type Name
                      DsRedEFGDsRed
                      EGFPEFGEGFP
                      1 - 2 of 2
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                      Mapping
                      No data available