Genomic Feature

ulg005

ID
ZDB-ALT-160317-9
Name
ulg005
Synonyms
  • ulg-M5 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Laboratory of Zebrafish Development and Disease Models
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 19071684 - 19071690 (GRCz11) (1) Details
Nucleotide change
AAACCCC/-
Variant Notes
Ghaye et al (2015): 7-bp deletion after the aa 141 codon, leading to the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation: at position 141 (1)
Sequences
Flanking Sequence
TTGTTTTCACGTTTTCCCGGGTCACTGTCCTGCTTCTTGCGCGATATTTAGTTAAAGTTGTAGTTTGTGTCTTGGTTATGTTAGCGGTGGGGCAAATGGACGGGTCTCGCCAAAGCGCTTTCCTACTCAATACCCCACCTTTAGCTGCTTTACACAGTATGACCGAGATGAAGACGCCGCTTTACCCAGCCTACCCGTTATCTTCCACTGGACCAGCATCCTCCACTTCACCGACAGCTACCTCTCCGAATCCAGGTGGGATCCCGGTCTCGTCCCCGGGGATCAAAACCTCCAGTGGACTTTCAGCTCTCGCATCAGCCCAGCAGTGCGCGATCGCCACACCTCACGGAATAAACGACATCCTCAGCCGACCCTCGGTGGCTTGTTCTCCCGCAGGAATCTTGTCTGGACTGCCCCGTTTCAGCAGCCTGAGTCCCCCACCGCCTCCAGGGCTTTATTTCAGCCCTAGTGCCGCGGCTGTAGCGGTGGCTCGCTATCCC
AAACCCC/- TGACAGAGCTTCCCGGCAGAACCCCGATATTCTGGCCTGGAGTTATGCAAAGCCCACACTGGAGAGATGCCAGATTTGCGTGCTCACCACGTAAGTGCACTTTTTGTTGTAGCGTCTGAATGATAACTTATTAACAATAATAACAAACATAATCACCATTAAAGGATGCGAAAATATCATTAGCTAATTTGGATTGTCTTCCTTTACAGATCAAAACTCAGTTCTGCTCGACAAAGATGGGAAAAGGAAACACACGCGACCGACGTTTTCCGGGCAGCAAATTTTTGCACTGGAAAAAACATTTGAGCAAACGAAATATTTAGCCGGCCCTGAAAGAGCCCGACTAGCCTACTCTTTAGGAATGACAGAGAGTCAAGTCAAGGTAAGACACCCAATAGTTTATGACGAAGGAACGAGGAAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations