Genomic Feature

a142

ID
ZDB-ALT-140611-7
Name
a142
Synonyms
  • allele 3, allele 28 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
TALEN 
Lab of Origin
Schier Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 1: 19673494 - 19673510 (GRCz11) (1) Details
Nucleotide change
TGTTTTGTACCATGTTT/TGTTTTGTTT
Variant Notes
TALEN-induced 12 nt deletion and 5 nt insertion generates frameshift allele  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp inserted / 17 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
TGTTCACAAGAGTCGTTTGCTCGTGAATCGGTCTCACATCTTTGTTTCACGTGCAGTCCGCAACACACAATTCGCAAATTTGAAATTCAGACTATAGCTATACAGTTCATTATGGCATCAAAGACTCCATGAATAACGTTTACCATTCTTTGCATATAATTTTTCAAATACAAATGAAAGTTACATTGGGTTAGAAAGCAAAAAGGTTCTTCCTCAAGGAGAATCAAGTGTGATTTAGACTACAAAATAGTCTAGATATATGGTTGACTGAAATATTTTCTTTTTAATCGACGTGACTTAATATTTTACATAGGTTTTTTTCAATCTATAAATTACAGGTAGGCTAGCCTACAACCGCCAACAGAACATTTTAAGTTTGTCTAAATGTTCGGAGCTTTGATTCAGTTCTTCGCCTCACAACATACTCGAATCGTTTGCCTCATGTTGTTTAGCCTAAAACTTGTCTATTTTAAGATGTGGTGGTGTTGAGTAGCTTACCG
TGTTTTGTACCATGTTT/TGTTTTGTTT ATCTGCGCTGATGAGGACCAGCACTGTCAGCAGCAGCAGCAGCAGATACAGCGGGTGGAAGAATCTCATGGTGATGCTCAGGGTGGTTTGGTCCGCGGCGCAGACTCGACTCTCCTCACAGGATGTCCGCGGTTCCTCAGACGATAAATTCTGTCGGATGTGCAGGTAACGGACTGTAGAAATCCTCTTATGTGTCTGTCGCTCTCAGCAAGTGTTCTCAGATCTCATATAAGTTGAGTTATATAGAAGACACGCAGTTGTAGCCAGCTCTCGGTCTCTCCAACTTTTTCAAAGTTTGAGAGGGCGATATTCACTCTCTCTTCTCTCTCTGTCCTCTGAGGGATGGATAGATAGACAGATGACCTGATGAGTGGGAATGTTCAGTTGAGACAATGTAGTTTCACCCCCTCTTTATACAGACAAGAGAAAGGGGAGGAGAGGGCACGACAGAGGAGGGGTATGAAAGACCTAAAACTGGGTGGGGACAGGGCATCACACAC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations