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Fig. 4
Exploring the 3D atlas with the visualization tool Atlas-IT.
(a) Atlas-IT interface displaying the template nuclei (light blue), segmented gene expression patterns of ntla (blue) and flh (green). (b) From left to right: equatorial, sagittal and dorsal views of the 9 individual gsc boundaries as compared to the mean gsc domain (red) at 6.3 hpf. (c) Evolution of the oep-gsc(mean) pair over time after being mapped onto the template. (d) Evolution of the oep-gsc(oep) pair over time in the analyzed embryo where they were co-stained. Scale bar 100 μm.
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