ZFIN is now using GRCz12tu for Genomic Data
Gene
tdrd1
- ID
- ZDB-GENE-070803-1
- Name
- tudor domain containing 1
- Symbol
- tdrd1 Nomenclature History
- Previous Names
-
- im:7155161 (1)
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables piRNA binding activity. Acts upstream of or within P granule organization. Predicted to be located in pi-body. Predicted to be active in P granule. Is expressed in oocyte stage I; oocyte stage II; primordial germ cell; and testis. Orthologous to human TDRD1 (tudor domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7155161 (6 images)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Huang et al., 2011
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002893 | Zinc finger, MYND-type |
| Domain | IPR002999 | Tudor domain |
| Domain | IPR047376 | Tudor domain-containing protein 1, first Tudor domain |
| Domain | IPR047377 | Tudor domain-containing protein 1, second Tudor domain |
| Domain | IPR047378 | Tudor domain-containing protein 1, third Tudor domain |
| Family | IPR050621 | Tudor domain-containing |
| Homologous_superfamily | IPR035437 | SNase-like, OB-fold superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | SNase-like, OB-fold superfamily | Tudor domain | Tudor domain-containing | Tudor domain-containing protein 1, first Tudor domain | Tudor domain-containing protein 1, second Tudor domain | Tudor domain-containing protein 1, third Tudor domain | Zinc finger, MYND-type |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q58EK5 | InterPro | 1175 | |||||||
| UniProtKB:F1Q7S6 | InterPro | 1176 | |||||||
| UniProtKB:A0A8M9QEB2 | InterPro | 1201 | |||||||
| UniProtKB:A0AB32U169 | InterPro | 1149 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers