FIGURE

FIGURE 5

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ZDB-FIG-230814-237

Publication

McClure et al., 2023 - 3' RNA-seq is superior to standard RNA-seq in cases of sparse data but inferior at identifying toxicity pathways in a model organism

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FIGURE 5

Number of enriched functions identified with 3′ and standard RNA-seq DEG lists using sparse data and q-value defined data. (A) Number of enriched functions using DEG lists from 3′ RNA-seq (red bars) and standard RNA-seq (blue bars) data across sparse data sets. Percent of the full data is shown in the x-axis. (B) GSEA analysis of full datasets from standard and 3′ RNA-seq. Venn diagram is shown for functions identified by both approaches (54) with the table below showing the six additional functions identified solely by standard RNA-seq.

Expression Data

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Antibody Labeling

Phenotype Data

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Acknowledgments

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