Genomic Feature

x60

ID
ZDB-ALT-210305-8
Name
x60
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Riley Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Assembly: GRCz11Chromosome: 6
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 49673093 - 49673099 (GRCz11) (1) Details
Nucleotide change
GTCTCTC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GTTCCATTAAAGGTACTTCAAAGCAGAATACTTATATTTATTTAAAAAAAAAAGCACATTTTTGAATGACGCACTTAATTAATTCACCCGATTTATATCATCACCTCATTATTGGAGGCTCAAAGAGTTGAATTGGGTGTGTCAGATAAGAGAGACAGTTAAAATGACCTGGACTATTATTGAAAACCTCCGCTTTAAAGCACCAGATCGTTTTCTAAAGAACCAGGGGATGAAAAGCTCTTTGTATGACTTGGAAAGCTTATTTAGTGGCATCACAATATAAAACCGTTTTGGTACTGATGGGAATCTTTATGATTAAAAATGCGAAAGTTCTTTAATGACGAATAGTTATACAGTGTCTCTTGCTTAGTATCTCCAATAGCATCCTGAAGAATTTTAAACCATTTGCTTTATTTAGAAAGAGAAAGAGAAGGTTAAAATACTCAATAACTAACCTTGCATGAGAAATACCATCCAGATTGTCCTCAGCAGGTGAATAA
GTCTCTC/- CCCAGCCATGATCGAGGACTTCCCAAATCAATTTAAAGATAAATCTAGGCTTCAAAAGAAAGATCTGGAAATTCTTGTCTATATTCTCCAGGACGGTCACATCAATGAGAGCATTCCAGATGAGATTTTACCACTTGTGCAGATCAGTGTAATCCACTTTTGATCAGTTTCATCTTCAAGCATGAAGTTTTCCATTCACGGTAAAACTCCTTGACCGACTTTCCAAGATCTCCTTTCTTGATGGTGCTTGAAAGTCTGTCCCTTGTTGATTGTCTGCTCTCCCTGGTGATGTTAAACCTGTGTGGTGCTTGTTAGAGTCTGTCTTTGGGTTACTCAGCTGAGAGAGTGAGCGAGAGTCTTGTGAGAGGGAGGGAAAGAGAGAGAGAGAGAAAGAAAGAGGAGGGAACTTGTAACCTCCCAGCATTAACCCTCTGGGGAGCACTCTGGGTAAGGTGCAAAAGGGCACAATCAAAGCCAGCAAGTTGGGAAACCTGCCCACA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
apcdd1lx60/x60Homozygous♀-/- ♂-/-Fig. 4 with image from Vonica et al., 2020Fig. 4 with image from Vonica et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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