ZFIN ID: ZDB-GENE-000330-3

Mapping Details

Gene Name:	transient receptor potential cation channel, subfamily C, member 4 associated protein a
Symbol:	trpc4apa

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	11	27,229,441 - 27,252,526	GRCz12tu
NCBI Map Viewer	11	27,229,441 - 27,252,526	GRCz12tu
Ensembl	11	25,157,374 - 25,180,330	GRCz11
NCBI Map Viewer	11	25,157,375 - 25,180,330	GRCz11
UCSC	11	-	GRCz11
Vega	11	24,919,758 - 24,942,714	GRCv10

Mapped Clones containing trpc4apa
CH211-25D12	Chr: 11 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa11819	11	27,248,720	GRCz12tu	DIRECT		Sealy et al., 2025
	11	25,176,524	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	24,938,908	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	26,110,083	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa41839	11	27,245,525	GRCz12tu	DIRECT		Sealy et al., 2025
	11	25,173,329	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	24,935,713	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	26,106,888	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa11819	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	11		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa41839	11		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
11	250.74 cR	tap1a	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
11	45.5 cM	tap1a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by trpc4apa
fb15d09 Chr: 11 Details