ZFIN ID: ZDB-GENE-030430-2

Mapping Details

Gene Name:	Sp5 transcription factor a
Symbol:	sp5a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	9	3,673,546 - 3,679,087	GRCz12tu
NCBI Map Viewer	9	3,673,546 - 3,679,087	GRCz12tu
Ensembl	9	3,666,401 - 3,671,911	GRCz11
NCBI Map Viewer	9	3,666,393 - 3,671,934	GRCz11
UCSC	9	-	GRCz11
Vega	9	3,694,872 - 3,700,382	GRCv10

Mapped Clones containing sp5a
DKEY-249G23	Chr: 9 Details
DKEY-88M1	Chr: 9 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa45343	9	3,676,145	GRCz12tu	DIRECT		Sealy et al., 2025
	9	3,668,992	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	9	3,697,463	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	9	3,665,442	Zv9	DIRECT		Busch-Nentwich et al., 2013
x69	9	3,668,896 - 3,668,903	GRCz11	DIRECT		Tan et al., 2022
sa45343	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
x69	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
9	0.0 cM	sp5	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
prpf40a	GENE	9	0.1 cM	Tallafuss et al., 2001	Tallafuss, et al. (2001. Dev 128:4021-4034.) report mapping sp5 to LG9 approximately 0.10 cM from wu:fb18h07 close to the hoxd cluster.

OTHER MAPPING INFORMATION: No data available

Genomic Feature x69 is an allele of sp5a