ZFIN ID: ZDB-GENE-000605-1

ZFIN ID: ZDB-GENE-000605-1

Mapping Details

Gene Name:	RUNX family transcription factor 1
Symbol:	runx1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	2,043,818 - 2,267,823	GRCz12tu
NCBI Map Viewer	1	2,043,818 - 2,267,823	GRCz12tu
NCBI Map Viewer	1	1,358,644 - 1,496,652	GRCz11

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hg1	1	1,395,348	GRCz11	DIRECT		Gau et al., 2017
	1	1,395,348	GRCz11	DIRECT		Jin et al., 2009
hg96	1	1,391,259 - 1,391,266	GRCz11	DIRECT		Bresciani et al., 2021
hg97	1	1,391,245 - 1,391,269	GRCz11	DIRECT		Zebrafish Nomenclature Committee
hg1	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
hg96	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
hg97	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
hg98	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
zko52a	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
1	0.0 cM	runxa	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z11913	SSLP	1	4.0 cR	Burns et al., 2002	Burns et al. (2002) report mapping runxa on the T51 RH panel between z11913 and z9382 on linkage group 1.
z9382	SSLP	1	3.0 cR	Burns et al., 2002	Burns et al. (2002) report mapping runxa on the T51 RH panel between z11913 and z9382 on linkage group 1.
z4593	SSLP	1		Kalev-Zylinska et al., 2002	Kalev-Zylinska et al. (2002, Development 128:2015-2030) report mapping runx1 to LG1 on the MOP panel.
z6177	SSLP	1		Kalev-Zylinska et al., 2002	Kalev-Zylinska et al. (2002, Development 128:2015-2030) report mapping runx1 to LG1 on the MOP panel.

Chr 1

Kalev-Zylinska et al., 2002

Kalev-Zylinska et al. (2002, Development 128:2015-2030) report mapping runx1 to LG1 on the ...

Genomic Feature hg97 is an allele of runx1