ZFIN ID: ZDB-GENE-021008-1

Mapping Details

Gene Name:	forkhead box N1
Symbol:	foxn1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	15	30,635,708 - 30,667,201	GRCz12tu
NCBI Map Viewer	15	30,635,708 - 30,667,201	GRCz12tu
Ensembl	15	28,129,683 - 28,148,314	GRCz11
NCBI Map Viewer	15	28,129,683 - 28,161,026	GRCz11
UCSC	15	-	GRCz11
Vega	15	28,196,807 - 28,215,438	GRCv10

Mapped Clones containing foxn1
DKEY-234F12	Chr: 15 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
ioz112	15	28,144,432 - 28,144,438	GRCz11	DIRECT		Lv et al., 2020
sa35901	15	30,641,014	GRCz12tu	DIRECT		Sealy et al., 2025
	15	28,134,903	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	15	28,202,027	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	15	27,483,787	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa45541	15	30,650,545	GRCz12tu	DIRECT		Sealy et al., 2025
	15	28,144,434	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	15	28,211,558	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	15	27,493,318	Zv9	DIRECT		Busch-Nentwich et al., 2013
fr107	8		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
ioz112	8		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa35901	8		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa45541	8		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
unc119b	GENE	8		Manning et al., 2004	Manning et al. (2004, Genesis 40(4):223-230) mapped unc119.1 to LG8 on the ...
fc23c10	EST	8		Manning et al., 2004	Manning et al. (2004, Genesis 40(4):223-230) mapped unc119.1 to LG8 on the ...
unc119a1	GENE	unknown		Schorpp et al., 2002	Schropp, et al. (2002. Mech Dev 118:179-185.) report physically mapping foxn1 and rtg4 about 5kb apart from each other in a tail-to-tail orientation on an unspecified linkage group.

Chr unknown	Schorpp et al., 2002	Schropp, et al. (2002. Mech Dev 118:179-185.) report physically mapping foxn1 and ...
Chr 8	Manning et al., 2004	Manning et al. (2004, Genesis 40(4):223-230) mapped unc119.1 to LG8 on the LN45 radiation hybrid ...

Genomic Feature ioz112 is an allele of foxn1