ZFIN ID: ZDB-GENE-050810-2

Mapping Details

Gene Name: calpastatin
Symbol: cast
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 21 12,935,520 - 13,025,239 GRCz12tu
NCBI Map Viewer 21 12,935,520 - 13,025,239 GRCz12tu
Ensembl 21 11,565,888 - 11,657,043 GRCz11
NCBI Map Viewer 21 11,565,888 - 11,657,036 GRCz11
UCSC 21 - GRCz11
UCSC 21 - GRCz11
UCSC 21 - GRCz11
Vega 21 11,473,260 - 11,564,415 GRCv10
Mapped Clones containing cast
DKEY-184P9 Chr: 21 Details
DKEY-93M12 Chr: 21 Details
DKEY-6B12 Chr: 21 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa3122 21 12,945,954 GRCz12tu DIRECT Sealy et al., 2025
21 11,576,320 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,483,692 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,000,329 Zv9 DIRECT Busch-Nentwich et al., 2013
sa8530 21 12,995,211 GRCz12tu DIRECT Sealy et al., 2025
21 11,624,464 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,531,836 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,048,473 Zv9 DIRECT Busch-Nentwich et al., 2013
sa11266 21 12,947,013 GRCz12tu DIRECT Sealy et al., 2025
21 11,577,379 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,484,751 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,001,388 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14469 21 12,947,223 GRCz12tu DIRECT Sealy et al., 2025
21 11,577,589 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,484,961 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,001,598 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14830 21 12,945,267 GRCz12tu DIRECT Sealy et al., 2025
21 11,575,633 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,483,005 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 9,999,642 Zv9 DIRECT Busch-Nentwich et al., 2013
sa15221 21 12,976,353 GRCz12tu DIRECT Sealy et al., 2025
21 11,605,606 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,512,978 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,029,615 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23868 21 12,982,917 GRCz12tu DIRECT Sealy et al., 2025
21 11,612,170 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,519,542 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,036,179 Zv9 DIRECT Busch-Nentwich et al., 2013
sa29534 21 12,974,726 GRCz12tu DIRECT Sealy et al., 2025
21 11,603,979 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,511,351 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,027,988 Zv9 DIRECT Busch-Nentwich et al., 2013
sa39318 21 12,974,618 GRCz12tu DIRECT Sealy et al., 2025
21 11,603,871 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,511,243 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,027,880 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43593 21 12,948,975 GRCz12tu DIRECT Sealy et al., 2025
21 11,579,341 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 11,486,713 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 10,003,350 Zv9 DIRECT Busch-Nentwich et al., 2013
la010507Tg 21 10,078,601 - 10,078,611 Zv9 ZFIN_Zv9 BurgessLin
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa3122 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa8530 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa11266 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa14469 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa14830 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa15221 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa23868 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa29534 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa39318 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa43593 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available
Genomic Feature sa29534 is an allele of cast
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