ZFIN ID: ZDB-GENE-001103-1

Mapping Details

Gene Name:	SRY-box transcription factor 9a
Symbol:	sox9a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	12	2,229,481 - 2,233,121	GRCz12tu
NCBI Map Viewer	12	2,229,481 - 2,233,121	GRCz12tu
Ensembl	12	1,947,593 - 1,951,233	GRCz11
NCBI Map Viewer	12	1,947,593 - 1,951,233	GRCz11
UCSC	12	-	GRCz11
Vega	12	1,927,596 - 1,931,236	GRCv10

Mapped Clones containing sox9a
CH73-314D5	Chr: 12 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi1134Tg	12	1,950,158 - 1,950,159	GRCz11	DIRECT		ZFIN Curated Data
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sox9a_unspecified	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
tw37	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zc81Tg	12		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
12	15.6 cM	sox9a	Mother of Pearl (MOP)	Postlethwait, John H.	Data
12	2.5 cM	sox9a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by sox9a
fj17b12 Chr: 12 Details

Genomic Feature zc81Tg is an allele of sox9a