ZFIN ID: ZDB-GENE-031116-52

Mapping Details

Gene Name: integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
Symbol: itga5
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 23 36,404,388 - 36,516,444 GRCz12tu
NCBI Map Viewer 23 36,404,388 - 36,516,444 GRCz12tu
Ensembl 23 33,447,625 - 33,558,161 GRCz11
NCBI Map Viewer 23 33,447,625 - 33,558,158 GRCz11
UCSC 23 - GRCz11
Vega 23 33,521,094 - 33,631,630 GRCv10
Mapped Clones containing itga5
DKEY-220D15 Chr: 23 Details
DKEY-32G6 Chr: 23 Details
DKEY-27M20 Chr: 23 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
b926 23 33,501,388 GRCz11 DIRECT ZFIN Curated Data
cu20 23 33,557,795 - 33,557,798 GRCz11 DIRECT Charlton-Perkins et al., 2019
sa13598 23 36,456,530 GRCz12tu DIRECT Sealy et al., 2025
23 33,499,760 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 33,573,229 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 33,713,431 Zv9 DIRECT Busch-Nentwich et al., 2013
sa13837 23 36,410,180 GRCz12tu DIRECT Sealy et al., 2025
23 33,453,417 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 33,526,886 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 33,667,088 Zv9 DIRECT Busch-Nentwich et al., 2013
sa44025 23 36,415,130 GRCz12tu DIRECT Sealy et al., 2025
23 33,458,362 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 33,531,831 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 33,672,033 Zv9 DIRECT Busch-Nentwich et al., 2013
tbfe1 23 33,496,336 GRCz11 DIRECT ZFIN Curated Data
tbfe2 23 33,496,308 GRCz11 DIRECT Jülich et al., 2005
xu0436 23 36,453,030 - 36,453,039 GRCz12tu DIRECT Yan et al., 2025
la014415Tg 23 33,765,085 - 33,765,095 Zv9 ZFIN_Zv9 BurgessLin
la022674Tg 23 33,709,899 - 33,709,909 Zv9 ZFIN_Zv9 BurgessLin
la022675Tg 23 33,760,759 - 33,760,769 Zv9 ZFIN_Zv9 BurgessLin
la022676Tg 23 33,760,896 - 33,760,906 Zv9 ZFIN_Zv9 BurgessLin
b926 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
cu20 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
itga5_unspecified 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
kt293 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING linkagesDirectMem1
23 GRCz11 OTHER_MAPPING linkagesDirectMem2
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
kt451 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
kt664 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la014415Tg 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la022674Tg 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la022675Tg 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la022676Tg 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa13598 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa13837 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa44025 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
tbfe1 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
tbfe2 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z20492 SSLP 23 Crump et al., 2004 Crump et al.(2004 PLoS Biol. 2(9):E244) reports mapping itga5b926 to LG 23 between the markers Z5141 and Z20492.
z5141 SSLP 23 Crump et al., 2004 Crump et al.(2004 PLoS Biol. 2(9):E244) reports mapping itga5b926 to LG 23 between the markers Z5141 and Z20492.
z5141 SSLP 23 Jülich et al., 2005 bfe was mapped via meiotic recombination to a 144 kb region containing a  ...

OTHER MAPPING INFORMATION
Chr 23 Crump et al., 2004 Crump et al.(2004 PLoS Biol. 2(9):E244) reports mapping itga5b926 to LG 23  ...
Chr 23 Jülich et al., 2005 bfe was mapped via meiotic recombination to a 144 kb region containing a predicted homolog of  ...
Markers Encoded by itga5
fe02h07 Chr: 23 Details
Genomic Feature kt293 is an allele of itga5
Marker Type Chr Distance Publication / Person Comments
z20725 SSLP 23 5.56 cM Koshida et al., 2005
z5141 SSLP 23 1.33 cM Koshida et al., 2005
Genomic Feature kt293 is an allele of itga5
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