Genomic Feature

co3005

ID
ZDB-ALT-240220-2
Name
co3005
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Nichols Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 36552295 - 36552298 (GRCz11) (1) Details
Nucleotide change
CAAG/-
Variant Notes
There is a 4 bp deletion in exon 2 which is predicted to cause a frameshift  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTAGTCCTGACCTCGGTGTTAACCCCTTCACATGTGGACAGGAACCGGGTAACCTCGTTCATGCATTCACTGAATCCAGCTCGGTACTTCCCAAGAACGGTGGGATCTGTGTTTAGGGCAGCTGTTGGGTAAACGAGAAAATAGATTAAGTTCAACTTAAATTATTTTAGCTCCTTAAACGTCTTTATTTTATTGCATTAGTTACATAAAGAGAATGCAAGGTGCATTTTCTGAAAGGTTTTAACTCTGGCGACTTACCGGTCATTTGTGCGCGCTGCATGTTTCTGAGATGTTTCACTGTCATCTCCAGGATGTCGGCTTTCTCAAGTTTAGAGTGTCTGGAGCTCTGAGAGTGAAGAAAGAGACTGATTTAGATATGCGGCTATATAAAGAAATGCATTAATATTCCAGCCAGATATAGCCTAACTGAAAGACTCAGTCGGACTTTCGGTACTTACATCTTTTTTCAGAGCATCCAAGATTAACGTTTTCAGCTGACC
CAAG/- CTTTCGTTGATTCTCGCTCTTCTTCTTTTCTCCATAATGGGTTTAGAAGACTAAAATGCAAAATAAAAACAAAATGAGTCAATCTGTCTAATCACTTCTTGAAGCACTATAGTTCGTAGCTTAATATCAATACCAACCTTTCTGTGTTCCGAAGCCGTTTTGGGTTTATCAGGTGTAGTGTTCATGCTCGCCGGAGTCGCGGCGACCGGAGAAGAGGAGTTTTTTTCCATGATATCGGCAGGCATCTTCTCTGGGAAGTATCCTTTCGTGATCTTGTTTATAAAAAGAAATCCTCCCGCACAGCTGCTTCTAGTGGAGTAAACGCTGTCAAGTACGCTGATACAGTTCCAGTTATGAATGGATATCCGCACGAAGTGTCCCGAGTTCAACTGGTGCGGCAATGATGTCACAGTCTCTGATTTCACCGTTCGCCAGCGGTCGTAGCAACTGCCTGCCTCAGCGTCGTGTTGGTCTTATTTATATCTCCGGCTGCACGCGAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations