Genomic Feature

gf1

ID
ZDB-ALT-220711-2
Name
gf1
Synonyms
  • pex2-typeB (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Takashima Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 23213157 - 23213167 (GRCz11) (1) Details
Nucleotide change
GCCGGCCCAAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted from position 23213157 to 23213167 in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCTAAAGTATTGAAAGAAAGAAAAAAGATTTTGAGATGTTTCCTGCAATTTTCATAAGCCAATTTATTTCAGATATTGTCCAAATCCCATCCTAAGCTAAGAGGTGGTCACCACAGCCCCTGGCTCTCATTTTTTAACCATTGCATTTAAAGAGATAAACCCAGGCCGATACAAACGCATTCCATGAAAAATTGCCAAACGTCACAGTTCTTAGATCCCTTATAAAAAGCCGTCAAAGTAAAGTAGTTCCACATAGCGGATGTTTACTGCCTTTCCAAGCCTGTGCTGTTGGGATAATCTCCTGTGATGTGATTTGTCCTCGAACTGAATCTCGAGAGGGAACAGCATAAGACCTCCTGTGCCTCTGCCCTGCACAGCTAAAAGGGAATTTAGGATGGGTTTTACATGTGAAAAGTGATTTCAACTCAAATGCAAAAATGCATAACCATTTCCTTCTTCTGCTTGTAGCTGGAGCTGGAGGTGACAAGCCTTTCGCCAAG
GCCGGCCCAAG/- CCCTTTATCTCGGGTTTTGAGAATCAGTCAGCTGGATGCTTTTGAACTGGATGGTGCACTGGAACAGCTTGTTTGGTCACAGTTCACCCAATGTTTCCAGCATTTTAAACCTGGGATCTTAACCCCTGTGGAACCAGAACTCAAAGCGCTTCTCCAGCTCCTCCTGTGGAGGTTCACCATCTACTCCAACAGTGCCACCGTGGGCCAGTCACTGCTCAACATTCGGTACAAGAATGCACTGATCCCGGGACAGAAATACCGGCCCATGAGTCGGCCACAGAAGTTTTGGTTTGCTTTGCTGACGGTGGGTGAAAAGTGGTTTAGAGAGCGCTCCCATAGCTTGTTTCTCAACCACCCAGCAGAGTCCAACGCTCGCAAAGCCCGTAAAGTACTCAGCATCTTGTTGGGCCTCACCAAAGCGGCCAGCCTGGTCAACTTCCTACTTTTCCTCCAAAGAGGAACCTTTCCGACCCTTACCGAAAGATTGTTGGGAGTGCAGC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations