Genomic Feature

hg119

ID

ZDB-ALT-220105-4

Name

hg119

Synonyms

None

Affected Genomic Region

tp63 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

CRISPR4-tp63

Lab of Origin

Sood Lab

Current Source

Other Pages

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 6: 28897572 - 28897573 (GRCz11) (1) Details
Nucleotide change: CC/-
Variant Notes: Deletion 2 bp in exon 6, ENSDART00000127965.4 c.540_541delCC, p.Gln181Glyfs*11.
Zebrafish Nomenclature Committee

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 2 bp deleted in Exon 6 (1)
Transcript Consequence: Frameshift , Premature Stop (1)
Protein Consequence: Amino Acid Substitution : Gln>Gly at position 181 (1)

Sequences

Flanking Sequence: TAATTAGGTTAACTAGGTGGGTTAGGGTAAATAGGCAAGTTACTGTATAACGATGGTTTGTTCTGTAGCTATTGAAAAAAAGCTTAAAGGGGCTAATAATTTTAACCTTAAAAGGGTGTTTAAAAAGTTAAAACTGCTTTTATTTTAGTTGAAATAAAACAAATAAGACTTTCTCTAGAATAAAAAAATATTATCAGACATACTGTGAAAATTCCCTTGCTTTGTTAAACAACATTTGGGAAATATTTAAAAATGTATGTATGTATGTATGTTTGTTTGCATGTATATATGTACGTGTTTTTATATATATTTATATAACTTCTCCAGTTTTTTAATGTTTATTTATTGGATTGGGAAAAAAGAAAGAATATTAATATTATTTGCTATGTGTAACCATGCTCGTCTCTCTGTTTTCTTTAGTACTCCACAGAGTTGAAGAAGCTGTACTGTCAGATTGCCAAAACATGTCCTATTCAAATCAAGGTCCTAACCAACCCACC
CC/- AGGGTGCAGTCATACGGGCCATGCCTGTCTATAAGAAAGCAGAGCATGTTACTGAGGTGGTCAAACGATGCCCGAACCACGAGCTGAGCAGAGAGTTCAATGACGGTATGCCACTCTTTTGTAATTGGACTGTATAAATTTGGCTAAACATTTTAATGTTCCATATAATTTACTGATTTTGTGTTCAATAGGCCAAATAGCCCCACCCAGTCACCTTATTAGGGTTGAGGGGAACAGTCACGCTCAATACGTGGAGGATTCCATTACTGGGCGTCAAAGTGTGCTGGTGCCTTATGAGCCCCCTCAGGTGAACACACACATACACACACCTACAATTACAGAAGAACTGCAGTGAACCTGGCTGTTCCTACAAACCCTGCACACCTGAAAGCACTCCCAGCAGATGTTAAAGCATTAGTTCAGTTCAAAATGAAAGTCTTTTACTCACCCTCATGACGTTTTAAGTAAACTCTTGTACATATACGGAACACACATGAATG
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations