Genomic Feature

xt53

ID
ZDB-ALT-211215-1
Name
xt53
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Tobin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 27110409 - 27110418 (GRCz11) (1) Details
Nucleotide change
GGTAGGTGGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 5 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAGAAGCTTAATAGCTGGCTGTGCTTTGACAGAAAAGTACAAAAAAGATTCATAAAACAAGTGATAAATGTGGAATTAATGACAACATTTTATCAACAGCGTAGATTAAAATTTGTCCTTTGATCATTTAACAATGTTTTGGACTATTTTCATATTCATAATAATCAACAGCTAATTCAGGCCAAACATGAAACACAAAAAAAAGTGAAAACTTCTCACTTCTTTCCCTAGAACTTGGTATGAAAAGTAATAGTAAAGAACAACTTTACCCACATTTATCATAATTAAATGTGGCATTATTACCATTCTAAAGTCATTATTTTTGCCACAAGCTGACAAAACAACTTGGACTTCATACCTTGAATCGTCTCTTTCTCCCAATTCAGTTCCTCTTGAAGCTGATGAAGTGTTTGGCGGCGATTCTGAATTTCCATAACTTTGGACATTAGATTCTCCACATCAGTCTTTTTCTCCTCCCATGCTTGTTGTGGGATGCCGTT
GGTAGGTGGA/- GGTGCGAAGGGAGGGAACTGCATATTCTTTAAACACACACAAACATCATGAACAACATCATAATAAATACAAATAATGCATTAAACACCTACATTTAAAACTGCTGTAGCATTTTGTCAACAAATCCTAAATGTTGCAAATGTTTTGTACTTACAGTCTGTGATAAAATTAGTCTTTCTTTCCTTAGAATCTCCCGAACTGTCCTCACAAGTTGTAAGGGTTGTGGGTAAAGCACACTCTATAGCACAGAAACAATTCAGCAGGTTACATCAAAAAGAGGAGGGAATACAAACAATGTGCTCTATGTCAACATGGCAGGCTGCCAATAGTAAGACATCCACTGAGTGTATGATAAAAAAGGAAGATTACTTTTAGTTTTGGTATAATTAATACAACATATCTGGACATACTACGCATTTATGTACAGTAGATCATCAAAAAAGAGACTTAGCCATTTTTCATTTCAAGTACCCTCAAATATGAGTTTGGATATGCATATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations