Genomic Feature

hg39

ID

ZDB-ALT-170801-9

Name

hg39

Synonyms

None

Affected Genomic Region

trnt1 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

CRISPR1-trnt1

Lab of Origin

Sood Lab

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 6: 43230607 - 43230619 (GRCz11) (1) Details
Nucleotide change: CCAGATCCTCTCG/-
Variant Notes: 13 bp deletion in exon 6, cDNA: 696delCGAGAGGATCTGG, p. E233WfsX3.
Zebrafish Nomenclature Committee

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 13 bp deleted in Exon 6 (1)
Transcript Consequence: None
Protein Consequence: None

Sequences

Flanking Sequence: GAGCTACATTACAATTGTTTACCCTCAAAAGTACAAATAAAGAGACTTCTATGATAATTCAGACATCAAAAGCATGCACATCACAGTCACTAGCTGTGTTTCCATCCAAAAATGTCAATTAACCTTTTGCGAAAAACTGGATTATCGCATAAAAGACGTGCAAATAAAGCAGTGTTTCTATTCAAGGAGTCAAAGCAAACAAAATCGTCACTTCCTTATTATTTATGTGCATTGTGGTGTTTCCATCAACTGATTTTTTATGCGCATCTCCAAAATGTGAATAAAATAGGTGGATGGAAACATAGCTACTGTCAGTATGAATTGCAATTTAATTAAAAAGCTTAAAAATCAAAATGAAAAAAATGAGCTGTAAGATGTTTCTCTACATATTTTCAATCACAATGTTTTTCCTCACCTGTGTACTGGGCTAAACCCAACTCATAGACGAGTTCCAGCAGGTGACCAGCATGATTTCCAACCAGCATCTTCTTCAACTCCAC
CCAGATCCTCTCG/- CCTGAGATTCCAGCCAATCCTCTAGCGTTTTCTCTTATTGCCTCCAAAGTCTCTGGTTCATGTTGGCCAGGTTCAGCTGCCACTCGTCCATAGAATCTACAGAGCAACCAAACCTCATAATTACTTTACCCTCGTACTGTTTCAAACATGCATGTGGATCAAAGACGAGAAGTTCCTTGTTGTTAAATTAATAGTAGTGATGGTGAAATGAAGCTTTCTGAACCAGTGAAGCACTCGACTCAATTGTATCGGAAAAAGGTTCGTTATTCGAAGCTTTCTAAATCAGAGCTCGATGAGGACCTCTTCTGGTGAAAGTGTGGGAAAGCACTGTGTTGCCATAATGTCAAATTTTCACAACTGACCAACTCATTCATGTAGTAATACAACAACAGCAATATAAACAAATTACTTAATTACTGTAGTTTTTACACAAGATATATTACATTACACAACTGATGATTGTAGTAAAATCCAAGGTATTCAAAAGTTTATCATAATAC
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations