Genomic Feature

ct844

ID
ZDB-ALT-170522-13
Name
ct844
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Prober Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 1016030 (GRCz11) (1) Details
Nucleotide change
C/-
Variant Notes
predicted mutant protein lacks all 7 transmembrane domains and is thus likely  ...
Mutant contains a 1 bp deletion (nucleotide 12 of the open reading frame:  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted at position 12 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TAAATAATTGAATCAGATTGGACCATTAGCATTTTGATCAGAAATGACCAAAGAGTTTTTATAATTCCCATATTTAAATATTCACTTCCATAGTTACACTAAGACCAACGGAAAAATGAAAAGTTACTATTTTATTGATATTATGCAGCACTTTTAGCTTAGCTTAGCATAGGTCATTGAATCAGATTAGACCATTAGCATCTTGCTCCAAAAATGTAAAAGAATTAACTTTTCACTTTTGATCTGTCATCGCACAAGATAAAACAATGTCAAGCTTTAAATACGAAAATGACCAAATCTCTCTTTATGAGCGTAATGCTAATGGTCTAATCCGATTCAATGATCTATGCTAAGCTAAGCTAAAAGTGCTAAACCAACTGAATAGATTCAAAACTCCACTGTTTAATTTGAGTTATGAATTGAATGAAAATAAATTGTGTGTTTCTTTATTTACAGTACCTAATTACTTTGCATCTCACAGAAACAGCCATGCAGGACGC
C/- AATATCAGCCACGTGGCAGCTGTATACGTGAGTCCTCACAGTCCCGTTCCTGTTCTGGATGTCCATGACTACACAGACTTTTACGACATGATGGACTACGGGGTCCCGGCGGAGGAGATGCCGGACACCACGCAGGGCCTGGCCTATTTTGTGGCCACCATCGTCATCGGTGTGGTTCTGGTCTGCATCATGCTGGTGTGCGGATTCGGAAACTTTGTGTTTATCGCCACTCTGGCCCGATATAAGAAGCTCAGAAACCTGACCAATCTGCTGATCGCCAACCTGGCCGTGTCGGACTTCATCGTGGCCGTGGTCTGTTGCCCGTTCCTGGTGGATTATTATGTGGTCAAGCAGCTGTCGTGGGATCATGGGAAGGTTTTGTGCGCCTCAGTTAATTACCTCAGGACTGTGTCTCTGTATGTGTCCACCAACGCCTTACTGGCCATCGCTGTCGACAGGTCAGTGGGATTTACATACTGTATACTAACCATGCACAAGAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations