Genomic Feature

bns1

ID
ZDB-ALT-160511-1
Name
bns1
Synonyms
  • bn1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Stainier Lab
Current Source
Other Pages
Notes
Comment Citation
p.Glu61Metfs*54 Rossi et al., 2016
10 bp deletion, resulting in frame shift beginning after glutamine Q60 and a  ... ZFIN Staff
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 4309248 - 4309257 (GRCz11) (1) Details
Nucleotide change
CGGGATACTC/-
Variant Notes
p.Glu61Metfs*54
10 bp deletion, resulting in frame shift beginning after glutamine Q60 and a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
at position 113 (1)
Sequences
Flanking Sequence
TATCTTAAAAGGCAGGTAATAAACCAATAGTTTTAGTAAGAACTGGTCCCCATACTGAAGTGTTACCAATTGTTATACAATGATTCGCCTAATTACCCTAACCTGCCTAATAAACCCAGTTAAGTCTTTAAATGTCACTTTAAGCTGGATACTAGTGTGTTGACAAATTTCTAGTCAAATATTATGTGCTGTCATCATGGCAAAGATAAAAAAAATAAGTTATTAGAAATGAGTTATTAAAACTATTATGTTTAGCAATGTGTTGAATAAAATCTTCATTTCATTAAACAGAAATTGGGGAAAAAATATACAGGAGGGCTAATAATTCTGACTTCATTTGTGTATATATATATATATGCACATGCTGGATTAAAGCTGTCTCACCTCCATAGTGACGTTTCGTGTCTCTGTCGGGACGCATTCGAGCGCCTCATCATTACAGCATCCTGCACAGCGCATGAGAACCACACAGGACGGGATGTACGTGTGCTCGATCTCAT
CGGGATACTC/- CTGGATGATGTCTACCAGCAGCTCTCGGGTCTTGCACGCACTCTTTTTATACACATCCATGAAGGGAATCACTGAGGAGGAAGCAAAGCGAGAGTGTTCAGTTACCGTCACACCGTTCTCCCGTTCAACTAAAGTTCTCTCAATGTTAACTTACCTTTGTGTCATTCCAAACCTGTCTGCTGTTATTAATTATTTTCTTCTGTTAAACACAAAAAGAGAGTTTTACAGCGACTCTTTTCCATGCATGACTGTTCATTCATTATTAACCATGACTGAGTCTGTTACTGCTTCGAAAAGTCTTTACCCTTGTGGAAAAAAATGTGCTGAAAGGGGCAGTTCATCCAAAAATGAACATTTACTATTTACTCGACCTCAAGTGGATATAAACCATTTATGAGCTTCATTTTTATGTTGAACACAACAGAAGATATTTTAAAGGAGGATGAAAACCTGTCGACTTACATAATAGGAAAAGCACATCCAATGGAAGTCAATGGTTA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations