Genomic Feature

sq28

ID
ZDB-ALT-160414-9
Name
sq28
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
zinc finger nuclease 
Lab of Origin
David P. Lane Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 4: 23129833 - 23129847 (GRCz11) (1) Details
Nucleotide change
GGAGGAGGAGAAGCA/-
Variant Notes
15 base pair in frame deletion in exon 7 of modm2.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
15 bp deleted in Exon 7 (1)
Transcript Consequence
Inframe Deletion (1)
Protein Consequence
None
Sequences
Flanking Sequence
ATTTTCTATATACGTACATAAGTTTGTAAGCATTGAAAGTGAAATTTGCTATTTGAATGATTAATTTTATTTTTTTTAGTGCCCTCTTTGCATTGATCAACAGAAACCTTGTCACAGTGAAAAATCCAGGTACCTTAAAAACTAGTTTCGTTTGTGCTTATTTATTTATTTTTAACAATATAGTTTTATTTGTACAAGCTATCTGTATTGTATTAAAACTAGTCTGATTTCCTTTTACAGAATCACAGTCTACCTTCTCTGAACCCAGGAGTCAAAGTGAACCAGATCGAGGACCCGGGGTAAATCTTCTTTTATACTCCCATTTAGAACCACAGAGTATTGACCCATTCCACAGAGTTGCCCTGGCAGTGCTGTGTTTGTGCTTGAATGGCTTTATAGAGCCCCTGCTGTGTTTGAGATTGAAGCATGACTGAAACCCAGCTTTCTGTTCCAGGATACAGATTCAGACTCTCGCTCATCTACCTCACAACAGCAGCGCA
GGAGGAGGAGAAGCA/- GTGATCCTGGTAAGGGCACACACCAGAGAGAAAGACACACAAACGCACCAGCTGTGGCCTGTTGAGTGTGTGTGAAAGCACACGCTTGATCAACTGGGGTTTCAGATAGAGCTCTGTTTTTACATTCAGCTCTCCCTGTACAGATATTTAGAGAATGGTTTCATGTTTGTTTTTATTCCAGTGTTTACAGATTTCCTGGTTGAACAGGAAAGGGCTTGTCCATTTTTGTTGTGTTTGTGTGTATGCATTATGCACTCAGGTAGAATTTAAGAAACGTTTTAATTAATTTAATAAGTTTACTTTCAGGTGTAAAACTTAACAAAAAACCTCATGTTGCACTGGTATATTTTTGGCAAGAGCTAAAAAAAAAAAAAAAAAAAATCATTCAAAGATCAAAATTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTTAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations