Genomic Feature

hg19

ID
ZDB-ALT-150805-2
Name
hg19
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Sood Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 14: 12099537 - 12099541 (GRCz11) (1) Details
Nucleotide change
TTATC/-
Variant Notes
Deletion 5 bp in exon 2, cDNA:291delGATAA, p:D98KfsX3
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted at position 291 in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TCAAAGAGGGGCTAATAATTCAGACTTCAACTGTGTATAAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTATTTATTGGTTATTTATTGGTTATTTATTGGTTATTTATTTATTTATTGGGTATTTATTGGTTATTTATTGGTTATTTATTGAATTACGTTCATTTTTGTATAGCGGGCCAGATTCTATTGATATTTATAAAAAGCCTCGCGGGCCGCCACAAAACTGATTGCGGGCCGCAGATGGCCCGCGGGCCGTAGTTTGGACACGCCTGGTCTACACAAAGAATATCAGCTGATACATTGATGGAACATTTTACTCCCTAATATGAGTATTGCCCTCAAAATAGTATTTTGGTTTGGCTATAGACATTACCAGCACAGATTTCCTAAATAATTAATTAGGGTTAGATAATAAACATGGTCTCACCTTATCCTTT
TTATC/- TTGTCGGGCATAAGGAAAGCATGGGATGACTGCAGTGACTCTAGTGGCAGATGCTATTTTGCATGCATTAATCATAATCAGAAGTTCCATAAGATTATCATTAATTTCACCACAGCCACTCTGGACAATGTACACATCTTCTCCACGAACACTCTCTCCAATCTCCACACTGCAGAAGACAGAACATGTTAAAGTTACATTAGTAACATGGTAAAAACCTATCTCAGCTGTTTACACAAATTGAAATGCAACATTTAGTTGATAATTCTTAAAATATTATTAAATTGTTCCACGACAAATAAAACGCATGCTCACTAAAGCTAGCTCAGGTCCCTGAAAGGGCCATGACTAGTTCTATTGTTAAGACCAATCTTAACTTCTGCTTCAAACGTATGCGTATGGTCCGGCACAGCCTCCGCCAACGTGCACCTCAAAAAATGTAACTACATATCGCAACGACACGTACTGTAGTGCAAGCTCTGTGATGGGTCAGATTGGTA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations