Genomic Feature

zd1013

ID
ZDB-ALT-150528-6
Name
zd1013
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Rodney Stewart Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 3: 40576670 - 40576674 (GRCz11) (1) Details
Nucleotide change
ACCAG/TGAAGAAGAAGCAGAAG
Variant Notes
Boer et al (2015): fscn1a+17, frame-shift insertion in exon 1 that generate  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
17 bp inserted / 5 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
CGTTCATCATGACTTTAATGCTTTTAAAAACATTTTATTATGTTGATATGGTCATCTAAAATCTGCATTTTAAATCTATATCTATAATTTAGCTCTCTAACTACAGTAATATTTAAGTATGACTAGTTTCACAAGGCATGACATCCCATATTTCTCTGTTTTCCAACTCATTTTTTGGGATGCGTGAGTGAGGAGAGGCGGGACGGCGCGTGACATCACTCATCTGTATAAAAGCCCCAGCTGTGTCTGTGCGCTCGCGCTGTGAGGCTGCAGAGAAAGAGAGAGAGAGAGAGGCGCGCGCACGCTCGCTCCAGCAAACAAAGAGACCCGTCAACATCATCCACGGTGCACCAGCAGATCCCGCTCCAGCAAGGCCACGAGCTGCAACCATGACTGCAAACGGAACCAGCGACATGCTCAAAATCCAATTCGGATTGATCAACTGCGGGAACAAGTACCTCACGGCCGAGACCTTCGGCTTCAAGATCAATGCATCAGCC
ACCAG/TGAAGAAGAAGCAGAAG CATGAAGAAGAAGCAGATTTGGACCCTGGAGCAAGACGGAGATGATTCAAACATGTTCTTCCTGAAGAGCCACCTGGGACGGTACATCGCAGCCGACAAAGACGGCAACGTGACGGGTGACAGCGAGACCCCGGGCGAGGACTGTCGCTTCATAATCACCGCACATGATGATGGGCGCTGGTCACTGCAGTCCGAGCCGCACAAGCGCTACCTGGGCGGCACCGAGGACAGGATAACCTGCTTCGCCCAGACCATCTCCATCGCGGAGAAATGGAGCGTGCACATCGCCATGCACCCACAGGTCAACATCTTCAGCGTGACTAGAAAAAGGTACGCGCACCTGAGCTCTGAGCAGAACGAGATAGCCATCGACCGGGATGTACCCTGGGGCGTGGATTCCCTCATCACCCTGGTCTTCCAGGACCAGAGGTACCACCTTCAGACCTCCGACAACCGCTTCCTGAAGAACGACGGCAGCCTGTCCCAGACGGCGGATAAGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations