Genomic Feature

st92

ID
ZDB-ALT-150219-4
Name
st92
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Talbot Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 14375496 - 14375505 (GRCz11) (1) Details
Nucleotide change
TGGAGTAATA/-
Variant Notes
mutation in xpr1a is a 10 bp deletion causing a frameshift resulting in a stop  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
at position 36 (1)
Sequences
Flanking Sequence
ATATTGTGTTGTATTATTATTTTCTTTTAGCGATTTATCCTTCTTTGTTTGAAATGTCCAGGCAGGTGTTTGACTTTTTTTTCCAGATGCACTGAACCCACAGCAAAATCACAATGAAATGAAAATCTAAAAAGATCAATACAATATAGACCTACGTAAATAAAAGTATATAGGTGGCAGCAAAAGTGAGCCTATATATAAATAAAAATAGCTTATAAATAAATAAATAGCCTAGAAAAAACACGAAGATAAAATAAGTAAAGTCAAATTTGATTCGACATTTGAGTTGTTTTCCAGAAATATTTCGTTTGGTATAATTTTTAAATCCATTATTCAACGCCTATTTCAATTGTAATATGTTGAATTCAAACAGCCCTCTGAAGTTGTGATTGGCGATAGGCTTTTCTGCTGTCAGTTTCTTCTCAACGCAACAACAAGAAGCGAACAGAAATCCTAAATAAATCTCTCACCTCATACTGAATGTACTGTTTCCTCCATTC
TGGAGTAATA/- TGGGCGGACAAGTGCTCCGCAAACTTCATGCTGGCGGAGCAGAAATCCAGTCAAACTATAATAATATCCTCAAAAGCGTCTTCTTCTTGTTCTTCGCGGCTTTTGTTATTATTTCTGTCACTAAGTTACTGAGCCTCACGCGTCGCGTTGCGCTCTGTCTAAATCCTGTCCGGTCTCTCGCAGTCCACTATTCCCCGGTCCCGCATACTGTATTACCCCGTTCAAAGTAAAACCCGCAACATAAGGGGACTAAAAGTGACCTCCTGCTACTCCCCGAAACAGGTGCCTGAATGACAGCAGCGGGAGCGAGAGTCTCTGGGAGTGACTTTCTCTCTTCGGACTCTCTGCGCGTTCGTATGAGCGCTTGTTGTCCGCCATCAGAAGCGCGCTCTCGGTGAAAGACGTGTGTGCGTCACAGTGCGCCGTGAGCTGCGTTTAAAAAAAGCTGTTTAAATTTTTATCATGCCTTTTGGTTTAATATACTTCAAATACATACGTAG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations