Transcript

ap2a1-002

ID

ZDB-TSCRIPT-131113-1761

Name

ap2a1-002 Nomenclature History

Previous Names

ch211-195b15.3-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ap2a1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000155416 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000155416.2|gene_biotype:protein_coding|ENSDARG00000054320.8 transcript_biotype:retained_intron cdna chromosome:GRCz11:3:32389560:32390332:1
ATTAAGTTCATTAATTTGTTCCCGGAGACAAAGAGCACCA
TTCAGGAAGTGCTGCGCTCCGACAGCCAGATCAGAAACAG
TGATGTCGAGCTGCAGCAGAGAGCAGTCGAGTATCTCAAA
CTGTCCTCCATCGCCAGCACTGATGTCCTGGCCACAGTGC
TGGAGGAGATGCCTCCATTCCCAGAGAGAGAGTCGTCCAT
CCTGGCCAAGCTGAAAAAGAAGAAAGGACCAGGAGCCGTG
TCTGTAAACGAATTAGAGGAGGGAAAGAGAGAGGGAGGAG
AACTAAATGGGGGAGGAGGAGAGAGAGGAGGAGACAACTC
CACCATTGCTGCATCTAATGCTGTGAGACACGAACTCTCT
TAATTCAAAACTATTTAATACAGTTGAAAAGTTGGGTTAG
CGTTTTTATTTTTACATAATTTATAAGTTCAACATTAAGT
TTGTTAAAAGTGATGTTTTATACTTGAAATCTATTTCAAA
CAGGGTTCTCGTGCTTCTTGAAAGTATTTAAAAGTACTTC
AATTTCAGACAATTCAGAACCTGAAAAAGTACTTAAACAA
GCACAGGTCTTTGAATGTGTTTGAATTTAATTTGAAATAC
GATGTATTATGTCAAAAACTGAATGAAAAAACTGAGAAAT
TGTTCAATTCAATCTATTTAAAACTTGTGCAATAACACTA
ACAA

OTTDART00000049626 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000049626|OTTDARG00000034944|ZDB-GENE-090302-2 ap2a1|no_translation CH211-195B15.3-002 LG_ CR936975.9 Danio rerio protein_coding NOVEL, 684 bp
ATTAAGTTCATTAATTTGTTCCCGGAGACAAAGAGCACCA
TTCAGGAAGTGCTGCGCTCCGACAGCCAGATCAGAAACAG
TGATGTCGAGCTGCAGCAGAGAGCAGTCGAGTATCTCAAA
CTGTCCTCCATCGCCAGCACTGATGTCCTGGCCACAGTGC
TGGAGGAGATGCCTCCATTCCCAGAGAGAGAGTCGTCCAT
CCTGGCCAAGCTGAAAAAGAAGAAAGGACCAGGAGCCGTG
TCTGTAAACGAATTAGAGGAGGGAAAGAGAGAGGGAGGAG
AACTAAATGGGGGAGGAGGAGAGAGAGGAGGAGACAACTC
CACCATTGCTGCATCTAATGCTGTGAGACACGAACTCTCT
TAATTCAAAACTATTTAATACAGTTGAAAAGTTGGGTTAG
CGTTTTTATTTTTACATAATTTATAAGTTCAACATTAAGT
TTGTTAAAAGTGATGTTTTATACTTGAAATCTATTTCAAA
CAGGGTTCTCGTGCTTCTTGAAAGTATTTAAAAGTACTTC
AATTTCAGACAATTCAGAACCTGAAAAAGTACTTAAACAA
GCACAGGTCTTTGAATGTGTTTGAATTTAATTTGAAATAC
GATGTATTATGTCAAAAACTGAATGAAAAAACTGAGAAAT
TGTTCAATTCAATCTATTTAAAACTTGTGCAATAACACTA
ACAA

Related Transcripts

Transcripts related to ap2a1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ap2a1-201 (1) Ensembl	Ensembl	1,163 nt	Select Tool ZFIN BLAST
mRNA	ap2a1-203 (1) Ensembl	Ensembl	5,380 nt	Select Tool ZFIN BLAST
mRNA	ap2a1-204 (1) Ensembl	Ensembl	590 nt	Select Tool ZFIN BLAST
mRNA	ap2a1-205 (1) Ensembl	Ensembl	791 nt	Select Tool ZFIN BLAST
ncRNA	ap2a1-002	Ensembl	684 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations