Transcript

phka1b-005

ID

ZDB-TSCRIPT-091110-1857

Name

phka1b-005 Nomenclature History

Previous Names

dkey-22f5.10-005
foxi3a-001

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

phka1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000171858 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000171858.2|gene_biotype:protein_coding|ENSDARG00000105039.3 transcript_biotype:retained_intron cdna chromosome:GRCz11:21:30611954:30614928:-1
CTGGTGAGCTGTACCTTTTCGAAAGGCACACATTTGTACT
TAAAGGGTCCATTTATATTGGTACCTCAAAGGTGTATATT
AGTACCTAAAATTTTCAAGAGGTACATATTCATAATTTTT
AGGTACTAGTATGTATCCTAGAGGTATTAAAGGGCACCTT
TTAGTTACAAACTTGTACATTTGTTACGGTACCACCGCTC
TCGTACCTTTATTTCTAAGAGTGTAGAATATAATTTAAAC
AGTTTCCAAAAAATCTAATTTCTAGAGAAAACAAATGGCA
TAATTGTGTTATGGAACTGTTTAAAAAGGCAGTACAACAT
CTCACAACACACTGTCATAATGATATCTCTCACCATTTCA
AAGGTGCCTGAGACGCAGACTCCTCCGTGTCTGAGTCTGC
CCAGAGACGTCAATGGCGGGATCGATTACTCAGCTCTCGT
GCAGATGCTGAAGCAGAATCTGAACCTGCAAGACAAGGCT
GATATCCTCTACATCCTTTTCAAAGACAAGGGAATAGACT
GGGACACCAAGCTACACGGGATAGGTTGGCCTGTAAGACG
ACTGCTGAGTGATTTGTATGAAAAAGCAGGAAGCCTGAAG
CACTGGGGCCTCATCCGGATGATCTGCGGGATGCTGCGCA
AGAAAGTGGAAGAGCTGGATGCTGCTTGCTCATACTTATT
AATCCATCAGAAACATCTAACAGTCGGCCTTCCTCCTGAA
CCAAGAGAGAAAACTA

OTTDART00000044038 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000044038|OTTDARG00000031618|ZDB-GENE-091204-81 phka1b|no_translation DKEY-22F5.10-005 LG_none CT025910.8,BX511168.5 Danio rerio protein_coding NOVEL, 736 bp
CTGGTGAGCTGTACCTTTTCGAAAGGCACACATTTGTACT
TAAAGGGTCCATTTATATTGGTACCTCAAAGGTGTATATT
AGTACCTAAAATTTTCAAGAGGTACATATTCATAATTTTT
AGGTACTAGTATGTATCCTAGAGGTATTAAAGGGCACCTT
TTAGTTACAAACTTGTACATTTGTTACGGTACCACCGCTC
TCGTACCTTTATTTCTAAGAGTGTAGAATATAATTTAAAC
AGTTTCCAAAAAATCTAATTTCTAGAGAAAACAAATGGCA
TAATTGTGTTATGGAACTGTTTAAAAAGGCAGTACAACAT
CTCACAACACACTGTCATAATGATATCTCTCACCATTTCA
AAGGTGCCTGAGACGCAGACTCCTCCGTGTCTGAGTCTGC
CCAGAGACGTCAATGGCGGGATCGATTACTCAGCTCTCGT
GCAGATGCTGAAGCAGAATCTGAACCTGCAAGACAAGGCT
GATATCCTCTACATCCTTTTCAAAGACAAGGGAATAGACT
GGGACACCAAGCTACACGGGATAGGTTGGCCTGTAAGACG
ACTGCTGAGTGATTTGTATGAAAAAGCAGGAAGCCTGAAG
CACTGGGGCCTCATCCGGATGATCTGCGGGATGCTGCGCA
AGAAAGTGGAAGAGCTGGATGCTGCTTGCTCATACTTATT
AATCCATCAGAAACATCTAACAGTCGGCCTTCCTCCTGAA
CCAAGAGAGAAAACTA

Related Transcripts

Transcripts related to phka1b

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	phka1b-201 (1) Ensembl	Ensembl	3,251 nt	Select Tool ZFIN BLAST
mRNA	phka1b-206 (1) Ensembl	Ensembl	3,644 nt	Select Tool ZFIN BLAST
ncRNA	phka1b-002 (1) Ensembl	Ensembl	571 nt	Select Tool ZFIN BLAST
ncRNA	phka1b-004 (1) Ensembl	Ensembl	766 nt	Select Tool ZFIN BLAST
ncRNA	phka1b-005	Ensembl	736 nt
ncRNA	phka1b-006 (1) Ensembl	Ensembl	222 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations