Transcript

phka1b-004

ID

ZDB-TSCRIPT-091110-1133

Name

phka1b-004 Nomenclature History

Previous Names

dkey-22f5.10-004
dkey-25l11.3-001

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

phka1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000161715 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000161715.2|gene_biotype:protein_coding|ENSDARG00000105039.3 transcript_biotype:retained_intron cdna chromosome:GRCz11:21:30616211:30617057:-1
GGAGGCCTGAGCCGCTTCAGGGCAGCAGCCAGAAAGGTTC
GAGAGATGGTGTCTCTAGTGCACAAAGCCAGAGAGCTCAA
TATACACAATGTGCATATGTACCTTCCAACTAAACTCTTC
CATTCTCCGGCACCAGACCTTAATCTGCTGGTTGACAAAG
AGAAGGTAGATAACATGAAATTAGCGGATTTTGCTGTGAT
TGTTGGAGTATTAATTAGAATAATTGCTTGGCTTTCTTTG
CTTTCTATTAAATGTGTGCTTGGTTTTCTTTCATTCAATT
AGGATTATATGTATTTATACTGTAACAGTTTTTACTGACT
ATGCACAAACCTTTAATCAAGACACCTGGAAATTTAGTGG
TTGTTCTGCGATTATTCTGTACTTGTCAAAAGTCACATTA
GGATTTTTTATTTTTACTTTTTTTGTTATTTGAGTTCTAC
TTTTTGATGTGAATTGAAAATAATTAAAAAATATATATAT
TTTCATAATAATAATAATTACTTATATTTATATATCACTT
TGGTCCAGACACTCAAATTGCTTTACCCATTTTGGGGGGG
ATCTCCTTGTCACAATAACCAGCAATCTAATGCCTACAGA
TCGCTGGTAAATTCACAGATCTGCTGGTATATGGACTACA
AGAATCAGTCATGCACCACACACTCACACCTGTTCCCCAC
TGATTGCTAACCCACACAGCTGAAGCTGTTCAGAACTGAT
TACATGGACTTTAAAAGCAGCACACACACACACACACACA
CACACA

OTTDART00000044037 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000044037|OTTDARG00000031618|ZDB-GENE-091204-81 phka1b|no_translation DKEY-22F5.10-004 LG_none CT025910.8,BX511168.5 Danio rerio protein_coding NOVEL, 766 bp
GGAGGCCTGAGCCGCTTCAGGGCAGCAGCCAGAAAGGTTC
GAGAGATGGTGTCTCTAGTGCACAAAGCCAGAGAGCTCAA
TATACACAATGTGCATATGTACCTTCCAACTAAACTCTTC
CATTCTCCGGCACCAGACCTTAATCTGCTGGTTGACAAAG
AGAAGGTAGATAACATGAAATTAGCGGATTTTGCTGTGAT
TGTTGGAGTATTAATTAGAATAATTGCTTGGCTTTCTTTG
CTTTCTATTAAATGTGTGCTTGGTTTTCTTTCATTCAATT
AGGATTATATGTATTTATACTGTAACAGTTTTTACTGACT
ATGCACAAACCTTTAATCAAGACACCTGGAAATTTAGTGG
TTGTTCTGCGATTATTCTGTACTTGTCAAAAGTCACATTA
GGATTTTTTATTTTTACTTTTTTTGTTATTTGAGTTCTAC
TTTTTGATGTGAATTGAAAATAATTAAAAAATATATATAT
TTTCATAATAATAATAATTACTTATATTTATATATCACTT
TGGTCCAGACACTCAAATTGCTTTACCCATTTTGGGGGGG
ATCTCCTTGTCACAATAACCAGCAATCTAATGCCTACAGA
TCGCTGGTAAATTCACAGATCTGCTGGTATATGGACTACA
AGAATCAGTCATGCACCACACACTCACACCTGTTCCCCAC
TGATTGCTAACCCACACAGCTGAAGCTGTTCAGAACTGAT
TACATGGACTTTAAAAGCAGCACACACACACACACACACA
CACACA

Related Transcripts

Transcripts related to phka1b

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	phka1b-201 (1) Ensembl	Ensembl	3,251 nt	Select Tool ZFIN BLAST
mRNA	phka1b-206 (1) Ensembl	Ensembl	3,644 nt	Select Tool ZFIN BLAST
ncRNA	phka1b-002 (1) Ensembl	Ensembl	571 nt	Select Tool ZFIN BLAST
ncRNA	phka1b-004	Ensembl	766 nt
ncRNA	phka1b-005 (1) Ensembl	Ensembl	736 nt	Select Tool ZFIN BLAST
ncRNA	phka1b-006 (1) Ensembl	Ensembl	222 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations