Transcript

smox-002

ID

ZDB-TSCRIPT-090929-6846

Name

smox-002

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Havana

Associated With Genes

smox (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000023903 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000023903|OTTDARG00000019455|ZDB-GENE-031201-3 smox|no_translation smox-002 LG_ BX004888.10 Danio rerio protein_coding KNOWN, 1902 bp
ATACAAAGAGAGACTCTCCGAATAGGCTATACAAAGAACA
GAGAGGATCGTTCAACGGTTTACGCTGAAGACGATAAAGT
CAGATTCCCTAGAAGAAGAGCTCGGACGGCATGCAAAGTT
GTGAAATATCTTCAGACAGCACTGATGATCCTCTTAGTAG
TGCCTTACACGGACATCGACAACCGCGAATAGTAGTGATT
GGTGCGGGCTTGGCCGGCCTTGCTGCTACCAAAACCCTCT
TGGAGAACGGCTTCACCAATGTTACGGTGCTAGAAGCCTC
AGACCGTATTGGAGGCAGAGTGCAAAGCATTCAGCACGGT
AAAACCACTTTGGAACTTGGAGCAACCTGGATCCATGGGG
CAAATGGGAACCCCGTCTACCACCTGGCTGAGGACAATGG
ACTGCTGGAGCACACCACAGAGGAGGAAAGGAGTGTGGGC
CGCATCAGCCTCTACGCCAAAAATGGTGTGGCCCACTACC
AGACCAATAATGGCAAGCGAATCCCGAAGGATCTGGTGGA
AGAGTTCAGTGACCTGTACAATGAGGTGATAGACGAGAGC
TGCATGGCATGTTTTATAAAATATGTACATATGATAAGTC
TAGGACCTCCTCAGGATGCAAAGCATTTCCAAAATGTGAT
GTGGTCACTTAAGTATTCGGCCGGCTCTATATTTGGTTCA
TTGACATTATAAGCAGAGTTTAAAGTCGGAGGATGCAGGG
TTCAACGTTAATGATTTTTTATACGGGTCCGATCGGGCCA
TTGCTTAAGATTTTTACTTGCCCTGTCAAAATTTTCACTA
GCCCCACCAAAAAAACTAAAAAGTTAATAGCTATTTCTTA
GCCACATATTTTAAATAGTGGCAAAATTATGCCTGTAGAA
TTTAAACATTTTAAATATGTTAATAAATGTATAATAAGCA
AAATTCAAGATTCAAGATTTTTTTCAAATGAAAGAGCAGT
ATGAAAAATGTGCTGGTGTTTTAATGCAATTCTAAATAAC
TTTTTATAAAAATGGCTTGCCAAACTGACAACTGTTTTTT
TGTTGTTCTCTTTTTCAGTTTCTTAATTTTGTACCCATGT
AATGGTCTGCTTCTAAGCCTTTAGAAACGTTTTCTTTTAG
CCTCATTGTTTAAATTTGCCACCATGTTGCCATCTTTTCA
CTGTACTGGTTGTCACCAGGTTACAAAAAAAAATAAACAA
AAAAAACATTCTCATCGTTACTGGCCGATAGGGGCCAGTA
ACAATCCTGTCTACTGTCCCGAGTGTCTTTCACGCTGGCC
CCGGGCCACCGGGCAGTCCTTATTGTTGAGCCCTGGGATG
GGCTTTGTTCATAAATGGCAAAGCTTTAGAGAATCTCAAC
ATTATGAAACCTAATATATAGTAGTCAACATTCAAAGTGA
ATCAGAAATGGTTTTCAAAATTGTCCTTGGACAGGAATGG
GTGTTGTTCAATAGTTTTAAGACAACTTTTGTGAAAGGTG
ATGATCCACTTCAAATGTTGACTACTGCATTGTAACTGCT
CCTACCTGTTTTTTTTTCTCCAATGAACACACCCTCAGGA
ATTGTTTTTTTTTTTTTTTTTTTAGAGAAAGCGATTCAAG
CTCAAGGCTGCCAGAGTAAAGTCTATATGTTTAGTTGTTG
ATTTCTTTTCTTGAGCTGTATCTCTCAGAGTGAACTTATC
GACCTCTCTATCTCTCCAACAATCTTTTGCTAGATCCCTG
TGTTGTTAAGAGACTTTTTATTCTATAAATTTACATTTGA
CAATGTATTATCAGGCACTGTATCATACAATAAATATTTG
GCAAGTTAAACTATCAGGTTTTTAACAACATGAGGGTGAG
TAAATTGACACTGTTAATTTTAGGTTGAACTATCCCATTA
AATAATTCATAATTTAGACAAG

Related Transcripts

Transcripts related to smox

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	smox-205 (1) Ensembl	Havana	965 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	smox-201 (1) Ensembl	Havana	2220 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	smox-206 (1) Ensembl	Ensembl	568 nt	Select Tool ZFIN BLAST
ncRNA	smox-002	Havana	1902 nt
ncRNA	smox-003 (1) Ensembl	Havana	836 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	smox-004 (1) Ensembl	Havana	774 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations