Transcript

ncl-203

ID

ZDB-TSCRIPT-090929-20284

Name

ncl-203

Previous Names

ncl-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

ncl (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000040103 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000040103|OTTDARG00000029258|ZDB-GENE-030131-6986 ncl|OTTDARP00000032058 CH1073-141J18.2-002 LG_none CU469540.4,CU539057.4 Danio rerio protein_coding KNOWN, 2671 bp
ACACGTGTGACTGAACGGTTCTTACCATCTCTCTCTTTCA
GTTATCAGCTTTACTGTAAAAACAGCCCTCAGTCATGGTA
AAGCTCGCTAAGAGGCAGCTAAAAAAGATGCGCCGCCGAA
GAAAAAGGCACCTCCACCTCCTAAAGAAGTGGAAGAGGAA
TCCAGCGAGGAGGACAGTGATGACGATGAGGAAGAAGAGG
CACCACCAGTCAAAGCTGTAGCGAAGAAAAACGCGGCTCC
TGTGAAGGCAGTGAAAAACGGAAAAGCTGCTGCCAAACAG
GAGAGTGAGGATGAAGATGACGACGATGAAGATGATGAAT
CTGAAGAGGAAGCTCCGCCTCCAAAGAAGGCCGCTAAAGC
TCCAGCTAAAGCAGCAGCTCCTGCAAAGAAAGCAGCTCCT
GCTGAAGAGTCCAGTGAAGAGGATGACGACGATGATGATG
ATGATGAATCCGAGGAAGAGGCTCCACCTCCCAAGAAGGC
TCCTGCCAAAGCTACACCAGCTAAAGCCACACCAGCCAAG
AAAGCAGCTCCCGTGAAGAAAGCAGCTCCTGCTGAGGAGT
CTGAGGATGACGATGATGATGATGAATCTGAAGAGGAAGA
AGCTCCGCCTCCTAAAAAAGCTGCAGCAGCGGCTAAACCT
GCAGCTAAAGCACCTGCAGCCAAAGAGGAGTCAGATGAAG
AGGAGGATGATGACGAAGAGGAGGATGGTGAATGATGATG
ATGAGGAGGAAGAAGCCCCGGCCACTCCAGCTAAGAGGAA
AGCCGAGACCAAAAAAGAGAAGGGAACGCCGCCGGCTAAG
AAGGCTAAAACCGATGGCGAGGGTTTCAGTCTTTTTTTGG
GCAACCTGAACAACAATAAAGACTTTGACGAACTGAAGTC
GGCTATCTCAAAGTTCTTCTCAAAGGAGGGCCTTGAAATT
CAGGATGTGCGACTTGGTGGAACAAAGTAAGAAATTCGGC
TACGTTGACTTCGCCTCAGAGGAAGAGTTGCAGAAGGCTT
TAGAGCTCAATGGCAAGAAGTTATTGGGTCAGCCAGTCAA
ACTGGACAAAGCCAGAAGCAAAGAGAACTCGCAGGAAAAC
AAGAAAGAGAGAGACGCCCGCACTTTATTCGTGAAGAATC
TTCCATACTCAATAACACAAGACGACCTGAGGGAAATCTT
TGACCAGGCTGTAGATATCAGAGTACCGATGGGCAACACC
GGCACTAGCAGAGGAATCGCCTACATTGAGTTCAAGACCG
AGGCCATTGCAGAGAAGGCTTTAGAGGAGGCGCAGGGCTC
AGATGTTCAGGGACGCTCCATCATCGTCGACTTCACAGGA
GACAAGAGTCGGCAGGGCGGCAGAGGTGCTCCGTCTGCAA
GTAAAGTGCTGGTGGTGAACAACCTGGCGTTCAGTGCGAG
TGAAGACTCCCTCCAGAGTGTGTTCGAGAAGGCCGTGTCC
ATCAGAATACCACAGAACAACGGCAGACCCAAAGGATATG
CGTTTGTGGAGTTTGAGAATGTGGAGGACTCCAAGGAGGC
GCTGGAGAACTGCAACAACACAGATATCGAGGGCAGGAGT
ATTAGATTAGAGTACAGCCAGAACGACAGAGAAAGAGGCG
GCGGAGGAAGAGGAAACTCTGGACCTACGAAAACCCTGTT
TGTCAAAGGCCTGTCAGACGACACCACAGATCAGACTCTG
AAAGACTCTTTTGATGGAGCCATCGCAGCCAGAATCGCCA
CAGACAGAGACACCGGATCATCGAAAGGGTTTGGTTTTGT
AGACTTCGATAACGAGCAAGACTGCAAGGCAGCTAAAGAA
GCCATGGATGACGGAGAGATCGACGGAAACAAAGTGACTC
TGGACTACGCCAAGCCCAAAGGAGAAGGTGGACGAGGAGG
ATTCGGCGGAGGAAGAGGAGGCTTTGGAGGACGAGGCGGC
GGAAGGGGTGGATTTGGAGGTAGAGGAGGAGGAGGACGAG
GTGGCGGATTCAGGGGAGGACGAGGAGGAAGAGGCGGCGG
CGGAGGATTCAGAGGAGGAAGAGGAGGAGGAGGCCGAGGT
GGATTCGGGGACAGACCACAAGGAAAGAAGATCAAGTTTG
ATGATTAAAGGTTTCACTGAATGAACTGTTTTCACTGCTT
AAATCCTCGTTGTCAGAGCGTTTCTAGGACATTCCAGAAG
GTCCCGGTGATGTACAGAGCCCCCCGTCCCCCTCGCCCCT
TTAACTGTGTGAGTTCTGCAGTGTCCCGCCATCCCTCAAC
ATTAATGTGAATGTTGTAATAATGCTCTGCTGGTTTAGGT
ACATGTTGTACATGCAACAGTTTCTTTTCCCATTTCTCTT
TTTTGTTACAGTGTCTATTCCTCCCTCTCTCCTCACTTTA
TTTCAAACCCAATTTTTATTTAATTTGTTTTTTTAAGTTT
GCTTTAGGGTGCCAGATTAATGTGCAGTACCTTTTTAATG
TGCAAAGCATATTGTAACGTATGCATAATTGACTCCTGTT
TAGTATTTAGAGATGTAAATCTGTATGAAAAAAGATTGAA
TGGGATACAGACCGAAAACAGCACGTGTTTTGTGATGTCA
AATTTATATGTAAATTAAATTTGGCTTTGACTTTAGGGTT
TTTCTTTTCCTCCAGTTCAGATTTTTTCATGATGTAAAGA
ACCATTTTGATTAAATATGGTTTTTAAACTA

Related Transcripts

Transcripts related to ncl

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ncl-203	Havana	2671 nt
mRNA	ncl-202 (1) Ensembl	Havana	3219 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ncl-003 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ncl-004 (1) Ensembl	Havana	456 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations