Transcript

lmo7a-203

ID

ZDB-TSCRIPT-090929-15379

Name

lmo7a-203 Nomenclature History

Previous Names

lmo7a-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

lmo7a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000134084 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000134084.2|gene_biotype:protein_coding|ENSDARG00000004930.11 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:9:21938278:21970067:-1
GTTATATAAGACTTGCTCGCTGAATTTCGACAAAATGATA
GTTTTGATACAGGCATTCGAGTAAGAAAAACGTTATACTT
GCTACCTTTTAATTGTAAACGAAGGCAGGTAGACTTAAAA
ATAGACTCGACTTTACGCGCGTGTTTGTGGTGGAGACACG
TTGACCGGTGATGGAGTGGCGACCGCAGTCTACTGTGGAC
TATGAGACTGTTTACTCAGAAGCACAGAGATGGATTGAGG
CAGTCACTAAGAAGAAGTTTGGGAACAGTAATTTCCGTAG
TTCTCTGGAGAATGGACTACTGTTGTTCTGATCAACAAGA
TCAAACCTGGCATCATCAAGAAACTAAACAGATTTTCCAC
ACCTATTGCTGGCCTGGACAACATCAACCTCTTCCTAAAA
GCCTGCGCTAAGCTTGGACTAAAAGAAGCACAGCTTTTCC
ACCCAGGAGACCTGCAAGACTTATCCACACGTGTGACTGT
CAAGCACCAGGAGAGCAGCAGGAGGCTCAAAAATGTTCTA
ATCACCATATATTGGTTGGGCAGAAAGGCACATGCTGATC
CATTTTATAATGGACCTTACCTAAAACTGAAGGCTTTCGA
GGGATTACTTGGCACCACACTATAT

OTTDART00000034643 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000034643|OTTDARG00000026179|ZDB-GENE-030219-74 lmo7a|OTTDARP00000028965 DKEY-57A22.10-002 LG_ CR536604.6 Danio rerio protein_coding NOVEL, 625 bp
GTTATATAAGACTTGCTCGCTGAATTTCGACAAAATGATA
GTTTTGATACAGGCATTCGAGTAAGAAAAACGTTATACTT
GCTACCTTTTAATTGTAAACGAAGGCAGGTAGACTTAAAA
ATAGACTCGACTTTACGCGCGTGTTTGTGGTGGAGACACG
TTGACCGGTGATGGAGTGGCGACCGCAGTCTACTGTGGAC
TATGAGACTGTTTACTCAGAAGCACAGAGATGGATTGAGG
CAGTCACTAAGAAGAAGTTTGGGAACAGTAATTTCCGTAG
TTCTCTGGAGAATGGACTACTGTTGTTCTGATCAACAAGA
TCAAACCTGGCATCATCAAGAAACTAAACAGATTTTCCAC
ACCTATTGCTGGCCTGGACAACATCAACCTCTTCCTAAAA
GCCTGCGCTAAGCTTGGACTAAAAGAAGCACAGCTTTTCC
ACCCAGGAGACCTGCAAGACTTATCCACACGTGTGACTGT
CAAGCACCAGGAGAGCAGCAGGAGGCTCAAAAATGTTCTA
ATCACCATATATTGGTTGGGCAGAAAGGCACATGCTGATC
CATTTTATAATGGACCTTACCTAAAACTGAAGGCTTTCGA
GGGATTACTTGGCACCACACTATAT

Related Transcripts

Transcripts related to lmo7a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lmo7a-203	Ensembl	625 nt
mRNA	lmo7a-201 (1) Ensembl	Ensembl	6,323 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-202 (1) Ensembl	Ensembl	812 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-204 (1) Ensembl	Ensembl	1,052 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-210 (1) Ensembl	Ensembl	663 nt	Select Tool ZFIN BLAST
mRNA	lmo7a-212 (1) Ensembl	Ensembl	754 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-008 (1) Ensembl	Ensembl	853 nt	(2 sequences)
ncRNA	lmo7a-206 (1) Ensembl	Ensembl	824 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-207 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-208 (1) Ensembl	Ensembl	895 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-209 (1) Ensembl	Ensembl	853 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-211 (1) Ensembl	Ensembl	914 nt	Select Tool ZFIN BLAST
ncRNA	lmo7a-213 (1) Ensembl	Ensembl	962 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations