PUBLICATION

The Zebrafish Information Network (ZFIN): a resource for genetic, genomic and developmental research

Authors
Sprague, J., Doerry, E., Douglas, S., Westerfield, M., and ZFIN GRP, (Conlin, T., Clements, D., Edwards, P., Frazer, K., Schaper, K., Segerdell, E.)
ID
ZDB-PUB-010207-3
Date
2001
Source
Nucleic acids research   29(1): 87-90 (Journal)
Registered Authors
Clements, David, Conlin, Tom, Doerry, Eck, Douglas, Sarah Ann, Edwards, Pat, Frazer, K., Schaper, Kevin, Segerdell, Erik, Sprague, Judy, Westerfield, Monte
Keywords
none
MeSH Terms
  • Animals
  • Chromosome Mapping
  • Databases as Topic
  • Genes/genetics
  • Genome
  • Information Services*
  • Internet
  • Mutation
  • Zebrafish/anatomy & histology
  • Zebrafish/genetics*
  • Zebrafish/growth & development
PubMed
11125057 Full text @ Nucleic Acids Res.
Abstract
The Zebrafish Information Network, ZFIN, is a WWW community resource of zebrafish genetic, genomic and developmental research information (http://zfin.org). ZFIN provides an anatomical atlas and dictionary, developmental staging criteria, research methods, pathology information and a link to the ZFIN relational database (http://zfin. org/ZFIN/). The database, built on a relational, object-oriented model, provides integrated information about mutants, genes, genetic markers, mapping panels, publications and contact information for the zebrafish research community. The database is populated with curated published data, user submitted data and large dataset uploads. A broad range of data types including text, images, graphical representations and genetic maps supports the data. ZFIN incorporates links to other genomic resources that provide sequence and ortholog data. Zebrafish nomenclature guidelines and an automated registration mechanism for new names are provided. Extensive usability testing has resulted in an easy to learn and use forms interface with complex searching capabilities.
Genes / Markers
Figures
Expression
Phenotype
Mutation and Transgenics
Human Disease / Model Data
Sequence Targeting Reagents
Fish
Antibodies
Orthology
Engineered Foreign Genes
Mapping
Errata and Notes