Community Action Needed: Please respond to the NIH RFI
ZFIN ID: ZDB-LAB-130905-1
Choe Lab
PI/Director: Choe, Seong-Kyu
Contact Person: Choe, Seong-Kyu
Email: seongkyu642@wonkwang.ac.kr
URL:
Address: Room 406 Department of Microbiology School of Medicine Wonkwang University 460 Iksan Dae-Ro Iksan, Jeonbuk, 570-749 South Korea
Country: South Korea
Phone: 82-63-850-6975
Fax: 82-63-855-6777
Line Designation: wk


GENOMIC FEATURES ORIGINATING FROM THIS LAB
Show all 2 genomic features


STATEMENT OF RESEARCH INTERESTS


LAB MEMBERS
Yoo, Kyeong-Won Post-Doc Bhandari, Sushil Graduate Student Kim, Yong-Il Graduate Student


ZEBRAFISH PUBLICATIONS OF LAB MEMBERS
Mao, Y., Hong, K.H., Liao, W., Li, L., Kim, S.J., Xiong, Y., Nam, I.K., Choe, S.K., Kwak, S.A. (2021) Generation of a Novel Transgenic Zebrafish for Studying Adipocyte Development and Metabolic Control. International Journal of Molecular Sciences. 22(8):
Choi, T.Y., Choi, T.I., Lee, Y.R., Choe, S.K., Kim, C.H. (2021) Zebrafish as an animal model for biomedical research. Experimental & molecular medicine. 53(3):310-317
Park, W.Y., Choe, S.K., Park, J., Um, J.Y. (2019) Black Raspberry (Rubuscoreanus Miquel) Promotes Browning of Preadipocytes and Inguinal White Adipose Tissue in Cold-Induced Mice. Nutrients. 11(9):
Kim, Y.I., Nam, I.K., Lee, D.K., Bhandari, S., Charton, L., Kwak, S., Lim, J.Y., Hong, K., Kim, S.J., Lee, J.N., Kwon, S.W., So, H.S., Linka, N., Park, R., Choe, S.K. (2019) Slc25a17 acts as a peroxisomal coenzyme A transporter and regulates multiorgan development in zebrafish. Journal of Cellular Physiology. 235(1):151-165
Choi, Y.M., Kim, Y.I., Choi, J.H., Bhandari, S., Nam, I.K., Hong, K., Kwak, S., So, H.S., Park, D.S., Kim, C.H., Choi, T.Y., Choe, S.K. (2019) Loss of abcd4 in zebrafish leads to vitamin B12-deficiency anemia. Biochemical and Biophysical Research Communications. 514(4):1264-1269
Kim, J.K., Kim, Y.S., Lee, H.M., Jin, H.S., Neupane, C., Kim, S., Lee, S.H., Min, J.J., Sasai, M., Jeong, J.H., Choe, S.K., Kim, J.M., Yamamoto, M., Choy, H.E., Park, J.B., Jo, E.K. (2018) GABAergic signaling linked to autophagy enhances host protection against intracellular bacterial infections. Nature communications. 9:4184
Park, S., Oh, J., Kim, Y.I., Choe, S.K., Chun, C.H., Jin, E.J. (2018) Suppression of ABCD2 dysregulates lipid metabolism via dysregulation of miR-141:ACSL4 in human osteoarthritis. Cell biochemistry and function. 36(7):366-376
Yoo, K.W., Maddirevula, S., Kumar, A., Ro, H., Huh, T.L., Rhee, M. (2017) Sinup is essential for the integrity of centrosomes and mitotic spindles in zebrafish embryos. Animal cells and systems. 21:93-99
Park, C., Ji, H.M., Kim, S.J., Kil, S.H., Lee, J.N., Kwak, S., Choe, S.K., Park, R. (2017) Fenofibrate exerts protective effects against gentamicin-induced toxicity in cochlear hair cells by activating antioxidant enzymes. International journal of molecular medicine. 39(4):960-968
Yoo, K.W., Thiruvarangan, M., Jeong, Y.M., Lee, M.S., Maddirevula, S., Rhee, M., Bae, Y.K., Kim, H.G., Kim, C.H. (2017) Mind Bomb-Binding Partner RanBP9 Plays a Contributory Role in Retinal Development. Molecules and cells. 40(4):271-279
Lim, H., Park, J., Kim, H.L., Kang, J., Jeong, M.Y., Youn, D.H., Jung, Y., Kim, Y.I., Kim, H.J., Ahn, K.S., Kim, S.J., Choe, S.K., Hong, S.H., Um, J.Y. (2016) Chrysophanic Acid Suppresses Adipogenesis and Induces Thermogenesis by Activating AMP-Activated Protein Kinase Alpha In vivo and In vitro.. Frontiers in pharmacology. 7:476
Kim, D., Song, J., Kang, Y., Park, S., Kim, Y.I., Kwak, S., Lim, D., Park, R., Chun, C.H., Choe, S.K., Jin, E.J. (2016) Fis1 depletion in osteoarthritis impairs chondrocyte survival and peroxisomal and lysosomal function. Journal of molecular medicine (Berlin, Germany). 94(12):1373-1384
Park, C., Kim, S.J., Lee, W.K., Moon, S.K., Kwak, S., Choe, S.K., Park, R. (2016) Tetrabromobisphenol-A induces apoptotic death of auditory cells and hearing loss. Biochemical and Biophysical Research Communications. 478(4):1667-73
Bhandari, S., Lee, J.N., Kim, Y.I., Nam, I.K., Kim, S.J., Kim, S.J., Kwak, S., Oh, G.S., Kim, H.J., Yoo, H.J., So, H.S., Choe, S.K., Park, R. (2016) The fatty acid chain elongase, Elovl1, is required for kidney and swim bladder development during zebrafish embryogenesis. Organogenesis. 12(2):78-93
Kim, Y.I., No Lee, J., Bhandari, S., Nam, I.K., Yoo, K.W., Kim, S.J., Oh, G.S., Kim, H.J., So, H.S., Choe, S.K., Park, R. (2015) Cartilage development requires the function of Estrogen-related receptor alpha that directly regulates sox9 expression in zebrafish. Scientific Reports. 5:18011
So, J.H., Kim, J.D., Yoo, K.W., Kim, H.T., Jung, S.H., Choi, J.H., Lee, M.S., Jin, S.W., Kim, C.H. (2014) FIH-1, a Novel Interactor of Mindbomb, Functions as an Essential Anti-Angiogenic Factor during Zebrafish Vascular Development. PLoS One. 9:e109517
Choe, S.K., Ladam, F., and Sagerström, C.G. (2014) TALE factors poise promoters for activation by Hox proteins. Developmental Cell. 28(2):203-211
Kim, Y. I., Bhandari, S., Lee, J. N., Yoo, K. W., Kim, S. J., Oh, G. S., Kim, H. J., Cho, M., Kwak, J. Y., So, H. S., Park, R., Choe, S. K. (2014) Developmental roles of D-bifunctional protein-A zebrafish model of peroxisome dysfunction. Molecules and cells. 37(1):74-80
Kim, Y.I., Lee, S., Jung, S.H., Kim, H.T., Choi, J.H., Lee, M.S., You, K.H., Yeo, S.Y., Yoo, K.W., Kwak, S., Lee, J.N., Park, R., Choe, S.K., and Kim, C.H. (2013) Establishment of a bone-specific col10a1:GFP transgenic zebrafish. Molecules and cells. 36(2):145-50
Choe, S.K., Nakamura, M., Ladam, F., Etheridge, L., and Sagerström, C.G. (2012) A Gal4/UAS system for conditional transgene expression in rhombomere 4 of the zebrafish hindbrain. Developmental dynamics : an official publication of the American Association of Anatomists. 241(6):1125-1132
Choe, S.K., Zhang, X., Hirsch, N., Straubhaar, J., and Sagerström, C.G. (2011) A screen for hoxb1-regulated genes identifies ppp1r14al as a regulator of the rhombomere 4 Fgf-signaling center. Developmental Biology. 358(2):356-67
Alexa, K., Choe, S.K., Hirsch, N., Etheridge, L., Laver, E., and Sagerström, C.G. (2009) Maternal and zygotic aldh1a2 activity is required for pancreas development in zebrafish. PLoS One. 4(12):e8261
Choe, S.K., Lu, P., Nakamura, M., Lee, J., and Sagerström, C.G. (2009) Meis cofactors control HDAC and CBP accessibility at Hox-regulated promoters during zebrafish embryogenesis. Developmental Cell. 17(4):561-567
Kim, H.T., Kim, E.H., Yoo, K.W., Lee, M.S., Choi, J.H., Park, H.C., Yeo, S.Y., Lee, D.S., and Kim, C.H. (2008) Isolation and expression analysis of Alzheimer's disease-related gene xb51 in zebrafish. Developmental dynamics : an official publication of the American Association of Anatomists. 237(12):3921-3926
Nakamura, M., Choe, S.K., Runko, A.P., Gardner, P.D., and Sagerström, C.G. (2008) Nlz1/Znf703 acts as a repressor of transcription. BMC Developmental Biology. 8:108
Choe, S.K., Hirsch, N., Zhang, X., and Sagerström, C.G. (2008) hnf1b genes in zebrafish hindbrain development. Zebrafish. 5(3):179-187
Woo, A.J., Moran, T.B., Schindler, Y., Choe, S.K., Langer, N.B., Sullivan, M.R., Fujiwara, Y., Paw, B.H., and Cantor, A.B. (2008) Identification of ZBP-89 as a Novel GATA-1 Associated Transcription Factor Involved in Megakaryocytic and Erythroid Development. Molecular and cellular biology. 28(8):2675-2689
diIorio, P., Alexa, K., Choe, S.K., Etheridge, L., and Sagerström, C.G. (2007) TALE-Family homeodomain proteins regulate endodermal sonic hedgehog expression and pattern the anterior endoderm. Developmental Biology. 304(1):221-231
Song, R., Koo, B.K., Yoon, K.J., Yoon, M.J., Yoo, K.W., Kim, H.T., Oh, H.J., Kim, Y.Y., Han, J.K., Kim, C.H., and Kong, Y.Y. (2006) Neuralized-2 regulates notch ligand in cooperation with mind bomb-1. The Journal of biological chemistry. 281(47):36391-36400
Yoo, K.W., Kim, E.H., Jung, S.H., Rhee, M., Koo, B.K., Yoon, K.J., Kong, Y.Y., and Kim, C.H. (2006) Snx5, as a Mind bomb-binding protein, is expressed in hematopoietic and endothelial precursor cells in zebrafish. FEBS letters. 580(18):4409-4416
Koo, B.K., Lim, H.S., Song, R., Yoon, M.J., Yoon, K.J., Moon, J.S., Kim, Y.W., Kwon, M.C., Yoo, K.W., Kong, M.P., Lee, J., Chitnis, A.B., Kim, C.H., and Kong, Y.Y. (2005) Mind bomb 1 is essential for generating functional Notch ligands to activate Notch. Development (Cambridge, England). 132(15):3459-3470
Choe, S.K., and Sagerström, C.G. (2005) Variable Meis-dependence among paralog group-1 Hox proteins. Biochemical and Biophysical Research Communications. 331(4):1384-1391
Koo, B.K., Yoon, K.J., Yoo, K.W., Lim, H.S., Song, R., So, J.H., Kim, C.H., and Kong, Y.Y. (2005) Mind bomb-2 is an E3 ligase for notch ligand. The Journal of biological chemistry. 280(23):22335-22342
Choe, S.K., and Sagerström, C.G. (2004) Paralog group 1 hox genes regulate rhombomere 5/6 expression of vhnf1, a repressor of rostral hindbrain fates, in a meis-dependent manner. Developmental Biology. 271(2):350-361
Son, O.-L., Kim, H.-T., Ji, M.-H., Yoo, K.-W., Rhee, M., and Kim, C.-H. (2003) Cloning and expression analysis of a Parkinson's disease gene, uch-L1, and its promoter in zebrafish. Biochemical and Biophysical Research Communications. 312(3):601-607
Park, S.-H., Yeo, S.-Y., Yoo, K.-W., Hong, S.-K., Lee, S., Rhee, M., Chitnis, A.B., and Kim, C.-H. (2003) Zath3, a neural basic helix-loop-helix gene, regulates early neurogenesis in the zebrafish. Biochemical and Biophysical Research Communications. 308(1):184-190
Choi, D.-K., Yoo, K.-W., Hong, S.-K., Rhee, M., Sakaki, Y., and Kim, C.-H. (2003) Isolation and expression of Napor/CUG-BP2 in embryo development. Biochemical and Biophysical Research Communications. 305(3):448-454
Yoo, K.W., Kim, C.H., Park, H.C., Kim, S.H., Kim, H.S., Hong, S.K., Han, S., Rhee, M., and Huh, T.L. (2003) Characterization and expression of a presomitic mesoderm-specific mespo gene in zebrafish. Development genes and evolution. 213(4):203-206
Choe, S.K. (2003) Essential roles of the Meis family proteins during segmentation of the zebrafish hindbrain. Ph.D. Thesis. :162P
Choe, S.K., Vlachakis, N., and Sagerström (2002) Meis proteins are essential for hindbrain development in the zebrafish. Developmental Biology. 247(2):495
Hong, S.K., Kim, C.-H., Yoo, K.-W., Kim, H.S., Kudoh, T., Dawid, I.B., and Huh, T.L. (2002) Isolation and expression of a novel neuron-specific onecut homeobox gene in zebrafish. Mechanisms of Development. 112(1-2):199-202
Choe, S.K., Vlachakis, N., and Sagerström, C.G. (2002) Meis family proteins are required for hindbrain development in the zebrafish. Development (Cambridge, England). 129(3):585-595
Vlachakis, N., Choe, S.K., and Sagerström, C.G. (2001) Meis3 synergizes with Pbx4 and Hoxb1b in promoting hindbrain fates in the zebrafish. Development (Cambridge, England). 128(8):1299-1312
Park, H.-C., Kim, C.-H., Bae, Y.-K., Yee, S.-Y., Kim, S.-H., Hong, S.-K., Shin, J., Yoo, K.-W., Hibi, M., Hirano, T., Miki, N., Chitnis, A.B., and Huh, T.-L. (2000) Analysis of upstream elements in the HuC promoter leads to the establishment of transgenic zebrafish with fluorescent neurons. Developmental Biology. 227(2):279-293