ZFIN Person: Choe, Seong-Kyu

ZFIN ID: ZDB-PERS-010202-3

ZFIN ID: ZDB-PERS-010202-3

Choe, Seong-Kyu

Email:	seongkyu642@wonkwang.ac.kr
URL:
Affiliation:	Choe Lab
Address:	Department of Microbiology School of Medicine Wonkwang University 460 Iksan-daero Iksan, Jeonbuk 570-749 South Korea
Country:	United States
Phone:	+82-63-850-6975
Fax:	+82-63-855-6777
ORCID ID:

BIOGRAPHY AND RESEARCH INTERESTS

PUBLICATIONS

Bhandari, S., Kim, Y.I., Nam, I.K., Hong, K., Jo, Y., Yoo, K.W., Liao, W., Lim, J.Y., Kim, S.J., Um, J.Y., Kim, P.K., Lee, H.S., Ryu, D., Kim, S.H., Kwak, S., Park, R., Choe, S.K. (2023) Loss of pex5 sensitizes zebrafish to fasting due to deregulated mitochondria, mTOR, and autophagy. Cellular and molecular life sciences : CMLS. 80:6969

Demers, N.D., Riccio, V., Jo, D.S., Bhandari, S., Law, K.B., Liao, W., Kim, C., McQuibban, G.A., Choe, S.K., Cho, D.H., Kim, P.K. (2022) PEX13 prevents pexophagy by regulating ubiquitinated PEX5 and peroxisomal ROS. Autophagy. 19(6):1781-1802

Bhandari, S., Hong, K., Miyawaki-Kuwakado, A., Tomimatsu, K., Kim, Y.I., Nam, I.K., Sagerstrom, C.G., Nakamura, M., Choe, S.K. (2022) nudt7 gene depletion causes transcriptomic change in early development of zebrafish. Journal of biochemistry. 173(1):53-63

Mao, Y., Hong, K.H., Liao, W., Li, L., Kim, S.J., Xiong, Y., Nam, I.K., Choe, S.K., Kwak, S.A. (2021) Generation of a Novel Transgenic Zebrafish for Studying Adipocyte Development and Metabolic Control. International Journal of Molecular Sciences. 22(8):

Choi, T.Y., Choi, T.I., Lee, Y.R., Choe, S.K., Kim, C.H. (2021) Zebrafish as an animal model for biomedical research. Experimental & molecular medicine. 53(3):310-317

Kim, D., Song, J., Kang, Y., Park, S., Kim, Y.I., Kwak, S., Lim, D., Park, R., Chun, C.H., Choe, S.K., Jin, E.J. (2019) Correction to: Fis1 depletion in osteoarthritis impairs chondrocyte survival and peroxisomal and lysosomal function. Journal of molecular medicine (Berlin, Germany). 97:1735

Park, W.Y., Choe, S.K., Park, J., Um, J.Y. (2019) Black Raspberry (Rubuscoreanus Miquel) Promotes Browning of Preadipocytes and Inguinal White Adipose Tissue in Cold-Induced Mice. Nutrients. 11(9):

Kim, Y.I., Nam, I.K., Lee, D.K., Bhandari, S., Charton, L., Kwak, S., Lim, J.Y., Hong, K., Kim, S.J., Lee, J.N., Kwon, S.W., So, H.S., Linka, N., Park, R., Choe, S.K. (2019) Slc25a17 acts as a peroxisomal coenzyme A transporter and regulates multiorgan development in zebrafish. Journal of Cellular Physiology. 235(1):151-165

Choi, Y.M., Kim, Y.I., Choi, J.H., Bhandari, S., Nam, I.K., Hong, K., Kwak, S., So, H.S., Park, D.S., Kim, C.H., Choi, T.Y., Choe, S.K. (2019) Loss of abcd4 in zebrafish leads to vitamin B₁₂-deficiency anemia. Biochemical and Biophysical Research Communications. 514(4):1264-1269

Kim, J.K., Kim, Y.S., Lee, H.M., Jin, H.S., Neupane, C., Kim, S., Lee, S.H., Min, J.J., Sasai, M., Jeong, J.H., Choe, S.K., Kim, J.M., Yamamoto, M., Choy, H.E., Park, J.B., Jo, E.K. (2018) GABAergic signaling linked to autophagy enhances host protection against intracellular bacterial infections. Nature communications. 9:4184

Park, S., Oh, J., Kim, Y.I., Choe, S.K., Chun, C.H., Jin, E.J. (2018) Suppression of ABCD2 dysregulates lipid metabolism via dysregulation of miR-141:ACSL4 in human osteoarthritis. Cell biochemistry and function. 36(7):366-376

Park, C., Ji, H.M., Kim, S.J., Kil, S.H., Lee, J.N., Kwak, S., Choe, S.K., Park, R. (2017) Fenofibrate exerts protective effects against gentamicin-induced toxicity in cochlear hair cells by activating antioxidant enzymes. International journal of molecular medicine. 39(4):960-968

Lim, H., Park, J., Kim, H.L., Kang, J., Jeong, M.Y., Youn, D.H., Jung, Y., Kim, Y.I., Kim, H.J., Ahn, K.S., Kim, S.J., Choe, S.K., Hong, S.H., Um, J.Y. (2016) Chrysophanic Acid Suppresses Adipogenesis and Induces Thermogenesis by Activating AMP-Activated Protein Kinase Alpha In vivo and In vitro.. Frontiers in pharmacology. 7:476

Kim, D., Song, J., Kang, Y., Park, S., Kim, Y.I., Kwak, S., Lim, D., Park, R., Chun, C.H., Choe, S.K., Jin, E.J. (2016) Fis1 depletion in osteoarthritis impairs chondrocyte survival and peroxisomal and lysosomal function. Journal of molecular medicine (Berlin, Germany). 94(12):1373-1384

Park, C., Kim, S.J., Lee, W.K., Moon, S.K., Kwak, S., Choe, S.K., Park, R. (2016) Tetrabromobisphenol-A induces apoptotic death of auditory cells and hearing loss. Biochemical and Biophysical Research Communications. 478(4):1667-73

Bhandari, S., Lee, J.N., Kim, Y.I., Nam, I.K., Kim, S.J., Kim, S.J., Kwak, S., Oh, G.S., Kim, H.J., Yoo, H.J., So, H.S., Choe, S.K., Park, R. (2016) The fatty acid chain elongase, Elovl1, is required for kidney and swim bladder development during zebrafish embryogenesis. Organogenesis. 12(2):78-93

Kim, Y.I., No Lee, J., Bhandari, S., Nam, I.K., Yoo, K.W., Kim, S.J., Oh, G.S., Kim, H.J., So, H.S., Choe, S.K., Park, R. (2015) Cartilage development requires the function of Estrogen-related receptor alpha that directly regulates sox9 expression in zebrafish. Scientific Reports. 5:18011

Choe, S.K., Ladam, F., and Sagerström, C.G. (2014) TALE factors poise promoters for activation by Hox proteins. Developmental Cell. 28(2):203-211

Kim, Y. I., Bhandari, S., Lee, J. N., Yoo, K. W., Kim, S. J., Oh, G. S., Kim, H. J., Cho, M., Kwak, J. Y., So, H. S., Park, R., Choe, S. K. (2014) Developmental roles of D-bifunctional protein-A zebrafish model of peroxisome dysfunction. Molecules and cells. 37(1):74-80

Choe, S.K., Nakamura, M., Ladam, F., Etheridge, L., and Sagerström, C.G. (2012) A Gal4/UAS system for conditional transgene expression in rhombomere 4 of the zebrafish hindbrain. Developmental Dynamics : an official publication of the American Association of Anatomists. 241(6):1125-1132

Choe, S.K., Zhang, X., Hirsch, N., Straubhaar, J., and Sagerström, C.G. (2011) A screen for hoxb1-regulated genes identifies ppp1r14al as a regulator of the rhombomere 4 Fgf-signaling center. Developmental Biology. 358(2):356-67

Alexa, K., Choe, S.K., Hirsch, N., Etheridge, L., Laver, E., and Sagerström, C.G. (2009) Maternal and zygotic aldh1a2 activity is required for pancreas development in zebrafish. PLoS One. 4(12):e8261

Choe, S.K., Lu, P., Nakamura, M., Lee, J., and Sagerström, C.G. (2009) Meis cofactors control HDAC and CBP accessibility at Hox-regulated promoters during zebrafish embryogenesis. Developmental Cell. 17(4):561-567

Nakamura, M., Choe, S.K., Runko, A.P., Gardner, P.D., and Sagerström, C.G. (2008) Nlz1/Znf703 acts as a repressor of transcription. BMC Developmental Biology. 8:108

Choe, S.K., Hirsch, N., Zhang, X., and Sagerström, C.G. (2008) hnf1b genes in zebrafish hindbrain development. Zebrafish. 5(3):179-187

Woo, A.J., Moran, T.B., Schindler, Y., Choe, S.K., Langer, N.B., Sullivan, M.R., Fujiwara, Y., Paw, B.H., and Cantor, A.B. (2008) Identification of ZBP-89 as a Novel GATA-1 Associated Transcription Factor Involved in Megakaryocytic and Erythroid Development. Molecular and cellular biology. 28(8):2675-2689

diIorio, P., Alexa, K., Choe, S.K., Etheridge, L., and Sagerström, C.G. (2007) TALE-Family homeodomain proteins regulate endodermal sonic hedgehog expression and pattern the anterior endoderm. Developmental Biology. 304(1):221-231

Choe, S.K., and Sagerström, C.G. (2005) Variable Meis-dependence among paralog group-1 Hox proteins. Biochemical and Biophysical Research Communications. 331(4):1384-1391

Choe, S.K., and Sagerström, C.G. (2004) Paralog group 1 hox genes regulate rhombomere 5/6 expression of vhnf1, a repressor of rostral hindbrain fates, in a meis-dependent manner. Developmental Biology. 271(2):350-361

Choe, S.K. (2003) Essential roles of the Meis family proteins during segmentation of the zebrafish hindbrain. Ph.D. Thesis. :162P

Choe, S.K., Vlachakis, N., and Sagerström (2002) Meis proteins are essential for hindbrain development in the zebrafish. Developmental Biology. 247(2):495

Choe, S.K., Vlachakis, N., and Sagerström, C.G. (2002) Meis family proteins are required for hindbrain development in the zebrafish. Development (Cambridge, England). 129(3):585-595

Vlachakis, N., Choe, S.K., and Sagerström, C.G. (2001) Meis3 synergizes with Pbx4 and Hoxb1b in promoting hindbrain fates in the zebrafish. Development (Cambridge, England). 128(8):1299-1312

NON-ZEBRAFISH PUBLICATIONS
Kim HJ, Oh GS, Shen A, Lee SB, Choe SK, Kwon KB, Lee S, Seo KS, Kwak TH, Park R, So HS. Augmentation of NAD(+) by NQO1 attenuates cisplatin-mediated hearing impairment (2014) Cell Death Dis.5:e1292.

Kim SJ, Lim JY, Lee JN, Choe SK, Kim YI, Song SR, Cho M, So HS, Park R. Activation of β-catenin by inhibitors of glycogen synthase kinase-3 ameliorates cisplatin-induced cytotoxicity and pro-inflammatory cytokine expression in HEI-OC1 cells (2014) Toxicology320:74-82.

Kim HJ, Oh GS, Choe SK, Kwak TH, Park R, So HS. NAD+ Metabolism in Age-Related Hearing Loss (2014) Aging Dis.5(2):150-159.

Jung SH, Kim HJ, Oh GS, Shen A, Lee S, Choe SK, Park R, So HS. Capsaicin Ameliorates Cisplatin-Induced Renal Injury through Induction of Heme Oxygenase-1 (2014) Mol Cells37(3):234-40.

Oh GS, Kim HJ, Choi JH, Shen A, Choe SK, Karna A, Lee SH, Jo HJ, Yang SH, Kwak TH, Lee CH, Park R, So HS. Pharmacological activation of NQO1 increases NAD(+) levels and attenuates cisplatin-mediated acute kidney injury in mice (2014) Kidney Int.85(3):547-60.

Lee JN, Dutta RK, Kim SG, Lim JY, Kim SJ, Choe SK, Yoo KW, Song SR, Park DS, So HS, Park R. Fenofibrate, a peroxisome proliferator-activated receptor α ligand, prevents abnormal liver function induced by a fasting-refeeding process (2013) Biochem Biophys Res Commun.442(1-2):22-7.