Fig. 5

Fig. 5

Fig. 5. Phylogenetic maximum likelihood tree of the nPKCd genes, rooted with the amphioxus nPKCd gene (prkcd.bbe) (A) after 1R, 2R and 3R (B) with chromosomal locations of the nPKCd genes and their neighboring gene families in human (C), chicken (D), spotted gar (E) and zebrafish (F). The tree topology is supported by a non-parametric Ultra-Fast Bootstrap (UFBoot) analysis. The full tree values in Newick format file can be downloaded as supplementary material. Crosses indicate gene loss or gene not yet identified. The number below each gene shows the position in the chromosome. The order of the genes along the chromosomes has been adjusted to highlight the similarities. Chicken and spotted gar illustrations are re-used with permission from Daniel Ocampo Daza, source: https://www.egosumdaniel.se and the human image is used with permission from https://commons.wikimedia.org. This paralogon is referred to as paralogon D in this study.