ZFIN is now using GRCz12tu for Genomic Data
Gene
shtn3
- ID
- ZDB-GENE-140106-61
- Name
- shootin 3
- Symbol
- shtn3 Nomenclature History
- Previous Names
-
- si:dkey-280e21.3 (1)
- zmp:0000001101
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within posterior lateral line neuromast primordium migration. Predicted to be active in axonal growth cone; cell leading edge; and cytoplasm. Is expressed in neuromast and posterior lateral line primordium.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Urasaki et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Urasaki et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR024849 | Shootin-1 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Shootin-1 |
|---|---|---|---|
| UniProtKB:A0A2Z6I959 | InterPro | 655 | |
| UniProtKB:A0AB32T0R2 | InterPro | 654 | |
| UniProtKB:A0AB32T0R3 | InterPro | 601 | |
| UniProtKB:A0AB32T7P7 | InterPro | 659 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-280e21.3-201
(1)
|
Ensembl | 1,822 nt | ||
| mRNA |
si:dkey-280e21.3-202
(1)
|
Ensembl | 5,934 nt | ||
| mRNA |
si:dkey-280e21.3-203
(1)
|
Ensembl | 1,961 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance