Gene

slc16a6a

ID

ZDB-GENE-110208-1

Name

solute carrier family 16 member 6a

Symbol

slc16a6a Nomenclature History

Previous Names

red moon (1)
rmn (1)

Type

protein_coding_gene

Location

Ambiguous Mapping Details/Browsers

Description

Enables monocarboxylic acid transmembrane transporter activity. Predicted to be involved in organic acid transport and organic anion transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in basolateral plasma membrane. Predicted to be active in plasma membrane. Is expressed in head; intestinal bulb; liver; pronephros; and swim bladder. Orthologous to human SLC16A6 (solute carrier family 16 member 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 4 figures from Hugo et al., 2012
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slc16a6a Human Ortholog

No data available

Associated With slc16a6a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR020846	Major facilitator superfamily domain
Family	IPR011701	Major facilitator superfamily
Family	IPR030766	Monocarboxylate transporter 7
Family	IPR050327	Proton-linked Monocarboxylate Transporter
Homologous_superfamily	IPR036259	MFS transporter superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A0R4IHG0	InterPro
UniProtKB:H6WYF6	InterPro	495
UniProtKB:A0A8M3AX51	InterPro	340

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	slc16a6-204 (1) Ensembl	Ensembl	1,670 nt	Select Tool ZFIN BLAST
ncRNA	slc16a6a-002 (1) Ensembl	Ensembl	667 nt	Select Tool ZFIN BLAST
ncRNA	slc16a6a-003 (1) Ensembl	Ensembl	556 nt	Select Tool ZFIN BLAST
pseudogenic transcript	fp885542.2-201 (1) Ensembl	Ensembl	3,169 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-slc16a6a	polyclonal	slc16a6a		Rabbit	WB		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations