Gene
col15a1b
- ID
- ZDB-GENE-070912-689
- Name
- collagen, type XV, alpha 1b
- Symbol
- col15a1b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Is predicted to be an extracellular matrix structural constituent. Involved in extracellular matrix organization. Acts upstream of or within eye development and regulation of motor neuron axon guidance. Predicted to be part of collagen trimer. Is expressed in several structures, including aortic arch; digestive system; nervous system; neural plate; and neural tube. Orthologous to human COL15A1 (collagen type XV alpha 1 chain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 29 figures from 11 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb491 (27 images)
- IMAGE:7158238 (13 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001791 | Laminin G domain |
| Domain | IPR010515 | Collagenase NC10/endostatin |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
| Homologous_superfamily | IPR016187 | C-type lectin fold |
| Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
| Protein | Length | Collagenase NC10/endostatin | Collagen triple helix repeat | Concanavalin A-like lectin/glucanase domain superfamily | C-type lectin fold | C-type lectin-like/link domain superfamily | Laminin G domain |
|---|---|---|---|---|---|---|---|
|
UniProtKB:F1QT12
|
1170 | ||||||
|
UniProtKB:A0A2R8QFF2
|
1170 | ||||||
|
UniProtKB:D3GN36
|
1169 | ||||||
|
UniProtKB:A0A0A1I9R6
|
1245 | ||||||
|
UniProtKB:F1QM25
|
1245 | ||||||
|
UniProtKB:C7SEQ6
|
236 |
| Type | Name | Length (nt) | Analysis |
|---|---|---|---|
| mRNA |
col15a1b-202
(1)
|
4560 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-col15a1b | polyclonal | Rabbit |
|
1 |
Plasmids
No data available