Gene
matn1
- ID
- ZDB-GENE-050307-3
- Name
- matrilin 1
- Symbol
- matn1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to enable calcium ion binding activity. Acts upstream of or within cartilage development. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Is expressed in several structures, including cartilage element; head; integument; notochord; and pectoral fin. Orthologous to human MATN1 (matrilin 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 8 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Neacsu et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000742 | EGF-like domain |
Domain | IPR001881 | EGF-like calcium-binding domain |
Domain | IPR002035 | von Willebrand factor, type A |
Domain | IPR019466 | Matrilin, coiled-coil trimerisation domain |
Family | IPR050525 | Extracellular Matrix Assembly and Organization |
Homologous_superfamily | IPR036337 | Matrilin, coiled-coil domain superfamily |
Homologous_superfamily | IPR036465 | von Willebrand factor A-like domain superfamily |
Domain Details Per Protein
Protein | Additional Resources | Length | EGF-like calcium-binding domain | EGF-like domain | Extracellular Matrix Assembly and Organization | Matrilin, coiled-coil domain superfamily | Matrilin, coiled-coil trimerisation domain | von Willebrand factor A-like domain superfamily | von Willebrand factor, type A |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:A5WWJ4 | InterPro | 489 | |||||||
UniProtKB:A0A8M9PN77 | InterPro | 446 |
Interactions and Pathways
No data available
Plasmids
No data available