Gene

trpa1b

ID
ZDB-GENE-050106-1
Name
transient receptor potential cation channel, subfamily A, member 1b
Symbol
trpa1b Nomenclature History
Previous Names
  • trpa1l (1)
  • trpa2 (1)
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Exhibits calcium-release channel activity. Involved in chemosensory behavior; detection of chemical stimulus involved in sensory perception of pain; and ion transmembrane transport. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in familial episodic pain syndrome 1. Is expressed in Rohon-Beard neurons and cranial ganglion. Orthologous to human TRPA1 (transient receptor potential cation channel subfamily A member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 9 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Faucherre et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With trpa1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
familial episodic pain syndrome 1 Alliance ?Episodic pain syndrome, familial, 1 615040
Associated With trpa1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005821 Ion transport domain
Homologous_superfamily IPR036770 Ankyrin repeat-containing domain superfamily
Repeat IPR002110 Ankyrin repeat
Domain Details Per Protein
Protein Length Ankyrin repeat Ankyrin repeat-containing domain superfamily Ion transport domain
UniProtKB:B6D5I5 1107
UniProtKB:Q5UM14 1120
UniProtKB:A0A8M9PU11 985
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations